Table 2. Sizes of experimental data sets.

The sizes differ between strands because only base calls mapping to the reference were used. Note that the counts of 2D events are based on the size of the alignment.

	E. coli training	E. coli testing	K. pneumoniae testing
# of template reads	3,803	3,942	13,631
# of template events	26,403,434	26,860,314	70,827,021
# of complement reads	3,820	3,507	13,734
# of complement events	24,047,571	23,202,959	67,330,241
# of 2D reads	10,278	9,292	14,550
# of 2D events	84,070,837	75,998,235	93,571,823