Table 3.
The matrix test sets assessed in the MSA construction evaluation
| Test set | Algorithm | Matrix numbers |
|---|---|---|
| PFASUM MSA Matrices | PFASUM | 31,43,60 |
| Standard MSA Matrices | BLOSUM | 50,62 |
| PAM | 250 | |
| VTML | 160,200 |
Official websites use .gov
A
.gov website belongs to an official
government organization in the United States.
Secure .gov websites use HTTPS
A lock (
) or https:// means you've safely
connected to the .gov website. Share sensitive
information only on official, secure websites.