Table 6.
Represented genes that may be related to salt stress-tolerance.
| Class of target | Functional annotation | Unigenes name/Accession number | EST number | Matching with | E-value |
|---|---|---|---|---|---|
| (1) Osmolyte biosynthesis | Acid beta-fructofuranosidase 4 | Contig2157 | 2 | A. lyrata | 0 |
| gene | Alpha-trehalose-phosphate synthase (TPS10) | Contig2925 | 2 | A. thaliana | E - 135 |
| 2-alkenal reductase (AER) | Contig369 | 1 | A. thaliana | 0 | |
| Betaine aldehyde dehydrogenase 2 (ALDH10A9) | Contig2945 | 2 | A. thaliana | E - 152 | |
| Delta-1-pyrroline 5-carboxylase synthetase 1 (P5CS1) | Contig4970 | 18 | A. thaliana | 0 | |
| (2) Transmembrane | Ca2+-transporting ATPase | Contig2566 | 2 | A. thaliana | 5E - 24 |
| transport and | CBL-interacting serine/threonine-protein kinase 9 (SOS2) | Contig3662 | 3 | A. thaliana | 0 |
| ion homeostasis | CBL-interacting serine/threonine-protein kinase 6 (SOS3) | Contig3526 | 3 | A. thaliana | 1E - 140 |
| H+-transporting ATPase | Contig3622 | 2 | A. thaliana | 1E - 90 | |
| Multidrug resistance protein ABC transporter | Contig4793 | 6 | M. truncatula | 0 | |
| Plasma membrane H+-ATPase 3 (PM-H+-ATPase) | Contig4385 | 4 | A. thaliana | 1E - 106 | |
| Sodium/hydrogen antiporter 1 (NHX1) | JZ944758 | 1 | A. thaliana | 1E - 162 | |
| Vacuolar-type H+-pumping pyrophosphatase 1 (VP1) | Contig4134 | 2 | A. lyrata | 1E - 162 | |
| V-type proton ATPase subunit E1 (V-ATPase) | Contig4804 | 8 | A. thaliana | 1E - 121 | |
| (3) Reactive oxygen | Catalase 3 (CAT3) | Contig5024 | 52 | B. rapa | 0 |
| scavengers | Glutathione S-transferase 16 (GSTF3) | Contig5012 | 31 | A. thaliana | 1E - 111 |
| L-Ascorbate peroxidase | Contig3656 | 2 | A. thaliana | 1E - 153 | |
| Metallothionein 2B (MT2B) | Contig4911 | 12 | A. thaliana | 1E - 40 | |
| Monodehydroascorbate reductase (NADH) | Contig4730 | 7 | A. thaliana | 0 | |
| Peroxidase 42 | Contig4650 | 6 | A. thaliana | 0 | |
| Plasma membrane intrinsic protein 2A (PIP2A) | Contig4691 | 6 | A. lyrata | 0 | |
| Thioredoxin H3 (TRXH3) | Contig4961 | 19 | B. divaricarpa | 1E - 48 | |
| (4) Stress protein | Aquaporin PIP1-2 (PIP1B) | Contig4912 | 12 | B. rapa | 1E - 163 |
| Cysteine proteinase RD21a (RD21a) | Contig4976 | 18 | A. thaliana | 0 | |
| Dehydrin ERD14 (ERD14) | Contig4956 | 16 | A. thaliana | 3E - 84 | |
| Heat shock protein 81-4 (HSP81-4) | Contig2465 | 2 | A. thaliana | 0 | |
| Late embryogenesis abundant protein (LEA3) | Contig4296 | 4 | A. lyrata | 1E - 138 | |
| low temperature and salt responsive protein LTI6B | JZ932940 | 1 | A. thaliana | 1E - 80 | |
| Osmotin-like protein (ATOSM34) | Contig3081 | 2 | A. thaliana | 1E - 138 | |
| Salt tolerance-like protein (STH) | Contig3575 | 2 | A. thaliana | 1E - 111 | |
| Stress-induced protein KIN2 (KIN2) | Contig3436 | 2 | A. thaliana | 2E - 26 | |
| (5) Signaling components | Calcium-dependent protein kinase 13 (CDPK13) | Contig2514 | 2 | A. lyrata | 3E - 94 |
| Calcium-binding protein CML13 (CML13) | JZ947887 | 1 | A. thaliana | 3E - 78 | |
| CBL-interacting serine/threonine-protein kinase 6 (CIPK6) | Contig3722 | 2 | A. thaliana | 1E - 140 | |
| Glycine-rich protein | Contig4824 | 8 | A. thaliana | 1E - 59 | |
| GTP-binding protein (GTPASE) | Contig3680 | 3 | H. annuus | 1E - 128 | |
| Leucine-rich repeat family protein | Contig4870 | 10 | A. thaliana | 0 | |
| (6) Metabolism | Aldehyde dehydrogenase 7B4 (ALDHB74) | Contig1650 | 1 | A. thaliana | 1E - 133 |
| Cytosolic malate dehydrogenase | Contig4330 | 4 | A. lyrata | 0 | |
| Glyceraldehyde-3-P dehydrogenase | Contig4944 | 15 | B. vulgaris | 1E - 171 | |
| Phosphoenolpyruvate carboxykinase 1 (PCK1) | Contig820 | 1 | A. thaliana | 1E - 150 | |
| Putative protein phosphatase 2C | Contig3997 | 3 | A. thaliana | 1E - 113 | |
| (7) Membrane fluidity | Bifunctional inhibitor/lipid-transfer protein | Contig4587 | 5 | A. lyrata | 3E - 86 |
| Lipid-transfer protein DIR1-like | JZ947168 | 1 | V. vinifera | 5E - 89 | |
| Non-specific lipid-transfer protein 4 (LTP4) | Contig4743 | 4 | A. thaliana | 5E - 54 |