Table 1.
Sequencing and mapping summary statistics of six samples from CMB area
| Samples | Pv96 | Pv113 | Pv128 | Pv129 | Pv138 | Pv204 |
|---|---|---|---|---|---|---|
| Sequencing and mapping | ||||||
| Number of reads | 34,817,405 | 215,617,516 | 36,303,847 | 71,449,001 | 36,731,899 | 34,210,120 |
| Mapped on P. vivax | 5,316,739 | 32,851,379 | 4,816,957 | 8,108,382 | 5,962,674 | 10,159,389 |
| Mapped (%) | 15.27 | 15.24 | 13.27 | 11.35 | 16.23 | 29.7 |
| Mean mapping quality | 35.38 | 37.63 | 37.01 | 36.72 | 38.28 | 36.05 |
| Coverage | ||||||
| Coverage fold | 17.32 | 108.72 | 14.55 | 21.16 | 19.79 | 40.41 |
| Genome covered (%) | 93.28 | 97.32 | 93.06 | 91.24 | 95.96 | 94.85 |
| Chromosomes covered (%) | 98.50 | 99.58 | 97.29 | 95.49 | 99.02 | 99.24 |