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. 2017 Jun 7;15:113. doi: 10.1186/s12916-017-0882-9

Table 1.

Overview of model parameters

Model parameters Contribution No. of parameters Prior Posterior
Distribution Mean SD Source Median CR
Study population Age group size Fixed 6 age groups KHDSS [4]
Contact patterns Fixed 6 × 6 age groups KHDSS [5]
Carriage prevalence Outcome 2 types × 6 age groups KHDSS [11]
IPD Outcome 2 types × 6 age groups KHDSS [12]
Observed vaccine coverage Fixed 27,040 (weekly age and time) KHDSS [4]
Transmission dynamics Clearance rates Fixed 2 types × 4 age groups KHDSS [15]
VE carriage (toddlers) Fitted - prior 1 Normal 0.36 0.15 KHDSS [11] 0.56 0.41–0.72
VE IPD (infants) Fitted - prior 1 Normal 0.80 0.1 [22] 0.86 0.67–0.99
Duration of protection (toddlers) Fitted - prior 1 Normal 6 years 3 [23, 24] 5.50 2.05–11.01
Relative level of infant protection Fitted - prior 1 Normal 1 0.1 Assumption 0.97 0.78–1.17
Competition parameter Fitted - prior 1 Log-normal 0.15 0.15 [17, 18] 0.19 0.07–0.44
Susceptibility to infection Fitted - no prior 2 types × 4 age groups
Invasiveness Fitted - no prior 2 types × 4 age groups

CR Credible range, VE Vaccine efficacy