Table 1. Clinical phenotypes associated with GARS variants in human.
Kawakami et al. (2014) |
Del Bo et al. (2006) |
Antonellis et al. (2003) |
Rohkamm et al. (2007) |
Sivakumar et al. (2005) Antonellis et al. (2003) |
Sivakumar et al. (2005) Antonellis et al. (2003) |
Lee et al. (2012) |
Lee et al. (2012) |
Liao et al. (2015) |
Liao et al. (2015) |
Sivakumar et al. (2005) Antonellis et al. (2003) |
Hamaguchi et al. (2010) |
James et al. (2006) |
James et al. (2006) |
James et al. (2006) |
Klein et al. (2014) |
Sivakumar et al. (2005) |
Dubourg et al. (2006) |
McMillan at al. (2014) |
This Study | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GARS variants |
c.815T>A p.Leu218Gln |
c.2016G>A p. Asp500Asn |
2094G>C p. Gly526Arg |
c.688 C > T p.Ala57Val |
c.730A>G p.Glu71Gly |
c.904C>T p.Leu129Pro |
c.598G>A p. Asp200Asn |
c.794C>T p. Ser265Phe |
c.598G>T p. Asp146Tyr |
c.875T>G p.Met238Arg |
c.1236G>C p.Gly240Arg |
c.893C>T p. Pro244Leu |
c.1358A>T p.Ile280Phe |
c.2313G>C p.Gly598Ala |
c.2260C>T p. Ser581Leu |
p.Ile334Phe |
p.His418Arg |
c.2094 A>G p.Gly526Arg |
c.1904C > T p.Ser635Leu c.1787G > A p.Arg596Gln |
c.803C>T p.Thr268Ile c.1234C>T p.Arg412Cys |
Inheritance | AD | AD | AD | AD | AD | AD | AD | AD | De novo | De novo | AD | ND | AD | De novo | AD | AD | AD | AD | AR | AR |
Protein domain potentially affected |
CD | Ins III | CD | WD | CD | CD | Ins I | Ins III | Ins I | CD | CD | CD | CD | ACBD | ACBD | Ins II | CD | CD | ACBD | CD |
Phenotype | CMT2 | CMT2D/ dSMA-V |
dSMA-V | dHMN-V | CMT2D/ dSMA-V |
dSMA-V | dHMN- V | dHMN- V | CMT2 | CMT2 | CMT2D | CMT2 | dHMN- V | Infantile SMA | CMT2 | CMT2 | dSMA-V | dHMN-V | MRCD | MRCD |
Cohort | 1 affected | 4 affected | 2 affected | 1 affected | 17 affected | 5 affected | 1 affected | 1 affected | 1 affected | 1 affected | 14 affected | 1 affected | 1 affected | 1 affected | 1 affected | 1 affected | 1 affected | 16 affected | 1 affected | 1 affected |
Age at onset |
<2 Years | 10–35 Years (average) |
13–26 Years (average) |
12 Years | 18 Years (average) | 16.9 Years (average) |
15Years | 13Years | <6 months | 2 Years | 23 Years (average) |
10 Years | 11Years | <6 m | 27 Years | 24 Years | 26Years (average) |
23.3Years (average) |
7 Years | 6 Years |
Consanguinity | NS | NS | NS | NS | NS | NS | NS | NS | NS | NS | NS | No | NS | NS | NS | NS | NS | No | No | No |
Ethnicity | Japan | Italy | Sephardic Jewish |
Ghana | Mongolia | Bulgaria | Korea | Korea | Taiwan | Taiwan | North America | Japan | UK | UK | UK | USA | UK/Australia | France | ND | UK/Australia |
Clinical features | delayed onset of walking, slow running | atrophy and weakness of the hand muscles | atrophy and weakness of the hand muscles | atrophy and weakness of the hand muscles | atrophy and weakness of the hand muscles | atrophy and weakness of the hand muscles | atrophy and weakness of the hand muscles | atrophy and weakness of the hand muscles | delayed milestones, severe generalised weakness | delayed onset of walking, unsteady gait | atrophy and weakness of the hand muscles | slow running | distal limb muscle atrophy and weakness | delayed milestones, severe generalised weakness | distal limb muscle weakness | progressive unsteadiness walking | atrophy and weakness of the hand muscles | atrophy and weakness of the hand muscles or distal four limbs | leukoencephalopathy, lactic acidosis and myalgia | fatigue, exercise-lactic acidosis, mild cardiomyopathy |
Functional studies | ND | ND | ND | ND | ND | ND | ND | ND | ND | ND | ND | ND | ND | ND | ND | ND | ND | ND | ND | MRC enzymology, immunoblotting for GARS protein and subunits for MRC enzyme complexes |
ND = not done; NS–not stated; CD: Catalytic domain, DI: dimer interface, WD: WHEP domain, Ins I: Insertion I domain, Ins II: Insertion II domain, Ins III: Insertion III domain, ACBD: anticodon binding domain; AD: autosomal dominant, AR: autosomal recessive; CMT2: Charcot-Marie-Tooth hereditary neuropathy type 2; CMT2D: upper limb predominant CMT2; SMA: Spinal muscular atrophy; dSMA: distal SMA, dHMN: distal hereditary motor neuropathy type V, MRC: Mitochondrial respiratory chain, MRCD: Mitochondrial respiratory chain disorder.