Table 2.
SNP distribution in the three genetic variation patterns
% of total SNPs
|
||||
---|---|---|---|---|
Data source | Large monomorphic | Large polymorphic | Fragmented blocks | p-value of χ2 testa |
Celera | ||||
All strains | 0.6 | 57.65 | 41.75 | N/A |
WI | ||||
Common strainsb | 0.22 | 58.45 | 41.34 | 0.91 |
All strains | 0.98 | 60.12 | 38.90 | 0.88 |
The p-value measures the similarity of SNP distribution in the WI data set with that of the Celera SNPs in these three regions.
The two strains included in both the WI and the Celera samples are C57BL/6J and 129S1/Svlmj.