TABLE 1.
Primer type | Primer name | Sequence (5′-3′) | Location (nt) |
---|---|---|---|
Consensus | 18 | ATGCCATGCCGACCCGAAGAGGAA | 889-912 |
55′ | GGAGAGACGGGATCACCGAAGAAGGAAGGC | 1310-1281 | |
Genotype specific | I5′-1 | TGGAAACCCGCTTTATTCAC | 940-959 |
I3′-1 | CAAGAGGAAGCAGCTATCGG | 1271-1252 | |
I3′-2 | CAAGAGGAAGCAGCTATCGT | 1271-1252 | |
IIb5′-1 | TGGAACCCTCGATCCTTTAT | 940-959 | |
IIb3′-1 | CAAGAAGAAGCAGCTCTCCT | 1271-1252 |