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. 2017 Jun 9;8:1054. doi: 10.3389/fmicb.2017.01054

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Copyright © 2017 Rychener, In-Albon, Djordjevic, Chowdhury, Nicholson, Ziech, de Vargas, Frey and Falquet.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Matrix representation of CRISPR spacers for each individual C. chauvoei strain. Identical spacers are assigned the same numerical value and color. The IS256 transposase is indicated with in pink and divides the CRISPR sequences into two arrays. White spaces are artificial due to the visual representation lining up identical CRISPR spacer sequences and do not represent DNA sequences of the individual genomes. The order of the strains, from top to bottom was arranged to follow clusters and subgroups of the phylogenetic tree of the SNV analysis (Figure 3).