Table 1.

Summary of sequencing data in the study

Sample name	Duplicates	Raw reads	Clean reads	Clean base (Gb)	Q20 (%)	Q30 (%)	Mapped (%)
I-1	a	43,959,191	42,775,222	6.4	96.48	89.53	88.26
	b	46,024,032	44,762,682	6.7	96.26	89.13	90.09
	c	42,180,866	41,017,933	6.2	96.44	89.39	90.27
I-3	a	43,175,970	42,015,916	6.3	96.22	88.98	90.80
	b	45,504,613	44,285,127	6.6	96.27	89.02	88.60
	c	44,279,976	43,069,779	6.5	96.21	88.92	89.89
I-5	a	42,440,949	41,273,811	6.2	96.23	89.1	90.55
	b	42,743,916	41,555,617	6.2	96.24	89.15	91.30
	c	44,936,847	43,704,884	6.6	96.18	89.03	88.96
I-7	a	42,302,608	41,142,107	6.2	96.32	89.28	89.19
	b	44,763,427	43,571,261	6.5	96.3	89.19	89.72
	c	43,916,414	42,749,930	6.4	96.34	89.29	91.32
II-1	a	45,999,850	44,785,102	6.7	96.22	89.01	87.18
	b	42,941,167	41,751,223	6.3	96.15	88.90	89.59
	c	44,268,235	43,109,075	6.5	96.38	89.33	89.47
II-3	a	46,881,460	45,686,432	6.9	96.37	89.37	91.09
	b	43,359,534	42,206,217	6.3	96.33	89.25	87.24
	c	42,641,431	41,496,401	6.2	96.37	89.37	89.72
II-5	a	43,358,527	42,183,431	6.4	96.28	89.16	89.88
	b	43,539,923	42,358,196	6.4	96.27	89.11	90.86
	c	44,335,544	43,109,720	6.5	96.13	88.86	87.38
II-7	a	45,463,769	44,240,714	6.6	96.23	89.2	89.75
	b	44,831,490	43,616,013	6.5	96.25	89.2	89.83
	c	43,771,968	42,577,304	6.4	96.24	89.2	90.88
C-1	a	43,428,497	42,233,801	6.3	96.13	88.9	87.67
	b	45,897,450	44,670,684	6.7	96.19	89.02	89.35
	c	43,842,260	42,652,596	6.4	96.32	89.27	89.79
C-3	a	45,354,222	44,137,729	6.6	96.02	88.58	90.71
	b	42,743,245	41,573,966	6.2	96.22	89.07	87.26
	c	44,613,776	43,405,844	6.5	96.13	88.83	89.09
C-5	a	44,397,927	43,195,411	6.5	96.21	89.14	89.99
	b	43,318,566	42,125,322	6.3	96.32	89.42	91.24
	c	45,299,655	44,111,640	6.6	96.28	89.2	88.44
C-7	a	44,182,777	42,985,305	6.4	95.72	87.96	89.51
	b	43,638,964	42,449,707	6.4	95.79	88.08	89.98
	c	45,255,896	44,734,541	6.7	95.6	87.67	91.07