TABLE 1.
Mutation(s) | Packaging reduction with respect to wta,b | Infectivity reduction with respect to wta,c | Heparin bindingd | Virus uptakee | Classf |
---|---|---|---|---|---|
E322A | UD | UD | + | ND | A |
E322A/V323D/T324N | UD | UD | + | ND | A |
T324Y | 2.0 ± 0.8 | 32 ± 8 | + | ND | I |
Q325A | 1.7 ± 0.5 | 4.5 ± 0.5g | + | ND | N |
N326A | 0.7 ± 0.1 | 1.2 ± 0.1 | + | ND | N |
N334A | 3.8 ± 1.5g | 1.1 ± 0.1 | + | ND | P |
N335A | 2.0 ± 0.5g | 2.1E4 ± 1.3E4g | + | + | I |
L336A | 1.2 ± 0.1 | 1.8E2 ± 0.5E2g | + | ND | I |
T337A | 1.1 ± 0.1 | 37 ± 12g | + | ND | I |
S338A | 8.9 ± 2.1g | 1.1E3 ± 0.7E3g | + | + | P + I |
D219A | 4.9 ± 1.2g | 1.1 ± 0.1 | + | ND | P |
del219/220 | 4.6 ± 1.5g | 61 ± 14g | + | + | P + I |
V221C | 3.2 ± 0.3g | 2.8E2 ± 0.4E2g | + | ND | P + I |
V221Y | 3.4 ± 0.7g | 1.7E3 ± 0.8E3g | + | + | P + I |
221Ins2Y | UD | UD | UD | ND | A |
N223A | 0.5 ± 0.1g | 1.3 ± 0.1g | + | ND | N |
Values are means plus or minus standard deviations from at least four independent experiments; UD, undetectable.
Packaging was measured as the ratio of capsids to viral genomes and compared to the ratio for wt AAV2. The number of assembled capsids was determined by a capsid ELISA (24); packaged DNA was quantified by a dot blot assay.
Infectivity was expressed as the ratio of genomes to infectious units and compared to the ratio for wt AAV2. Packaged DNA was measured by a dot blot assay; infectious AAV2 particles were quantified by a dot blot replication assay.
Heparin binding was measured as the percentage of viral particles which were applied to a heparin-agarose column and which were recovered by high-salt elution, as determined by a capsid ELISA; +, more than 90% binding.
Virus uptake (+) into cells was analyzed by indirect immunofluorescence microscopy. ND, not determined.
Mutants were classified according to their defects: A, assembly (more than a 10-fold reduction compared to that in the wt); I, infectivity (more than a 10-fold reduction compared to that in the wt); P, packaging (more than a 2-fold reduction compared to that in the wt); N, not affected.
In a comparison with the wt, the P value was <0.05.