Table 6. RNAseq of four M. incognita life stages, sequencing, cleaning and mapping.

Sequencing		Cleaning	Mapping to the genome
Libraries	Initial read pairs	Cleaned read pairs	Mapped read pairs	% mapped	% unique	% multi
egg-1	87 074 210	48 295 627	46 074 870	95.40	76.08	19.32
egg-2	94 158 382	48 492 099	46 562 165	96.02	76.02	20
egg-3	66 074 037	32 259 963	30 478 818	94.48	75.17	19.3
J2-1	72 958 025	32 264 784	29 720 974	92.12	72.42	19.7
J2-2	78 380 200	36 426 756	33 827 380	92.86	72.17	20.69
J2-3	80 099 032	32 972 463	28 181 323	85.47	67.05	18.42
J3J4-1	92 349 648	18 410 414	16 356 975	88.85	69.75	19.1
J3J4-2	60 483 114	11 793 967	10 875 445	92.21	73.35	18.86
J3J4-3	84 491 183	14 725 039	13 804 525	93.75	72.52	21.23
adult-1	68 718 904	15 362 025	14 462 874	94.15	72.08	22.07
adult -2	76 861 805	16 904 124	13 226 056	78.24	59.74	18.5
adult -3	79 680 298	20 839 034	15 621 417	74.96	57.15	17.81