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Comparison of PSSMHCpan with HLaffy. The prediction of HLaffy was performed on webserver (http://proline.biochem.iisc.ernet.in/HLaffy/).
| Allele | PSSMHCpan | HLaffy |
|---|---|---|
| HLA-A*0201 | 1.00 | 0.92 |
| HLA-A*0203 | 1.00 | 0.93 |
| HLA-A*0206 | 1.00 | 0.93 |
| HLA-A*0301 | 1.00 | 0.84 |
| HLA-A*1101 | 1.00 | 0.96 |
| HLA-A*2402 | 1.00 | 0.77 |
| HLA-A*3301 | 1.00 | 0.83 |
| HLA-A*6801 | 1.00 | 0.94 |
| HLA-A*6802 | 0.95 | 0.73 |
| HLA-B*0702 | 1.00 | 0.88 |
| HLA-B*3501 | 0.99 | 0.89 |
| HLA-B*5301 | 1.00 | 0.92 |
| HLA-B*5401 | 1.00 | 0.88 |
| All | 0.99 | 0.90 |
