Table 1.
Sequencing libraries used for the Teamaker genome assembly
Mate pair insert size (bp) | Number of sequenced reads | Number of single-copy + QC Reads | Portion removed from dedup + QC | Estimated coverage |
---|---|---|---|---|
9000 | 796 503 434 | 164 452 668 | 0.794 | 6.091 |
6000 | 363 664 930 | 96 117 630 | 0.736 | 3.560 |
5000 | 830 281 020 | 611 993 950 | 0.263 | 22.666 |
3000 | 618 181 114 | 379 821 668 | 0.386 | 14.067 |
Mate pair Total | 2 608 630 498 | 1 252 385 916 | 0.520 | 46.385 |
Fragment library insert size (bp) | ||||
143 | 1 655 421 082 | 708 994 796 | 0.572 | 26.259 |
173 | 1 176 857 672 | 606 418 512 | 0.485 | 22.460 |
250 | 419 621 690 | 388 494 910 | 0.074 | 14.389 |
Fragment total | 3 251 900 444 | 1 703 908 218 | 0.476 | 63.108 |