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. 2017 Apr 6;2017:bax009. doi: 10.1093/database/bax009

Table 1.

Sequencing libraries used for the Teamaker genome assembly

Mate pair insert size (bp) Number of sequenced reads Number of single-copy + QC Reads Portion removed from dedup + QC Estimated coverage
9000 796 503 434 164 452 668 0.794 6.091
6000 363 664 930 96 117 630 0.736 3.560
5000 830 281 020 611 993 950 0.263 22.666
3000 618 181 114 379 821 668 0.386 14.067
Mate pair Total 2 608 630 498 1 252 385 916 0.520 46.385
Fragment library insert size (bp)
143 1 655 421 082 708 994 796 0.572 26.259
173 1 176 857 672 606 418 512 0.485 22.460
250 419 621 690 388 494 910 0.074 14.389
Fragment total 3 251 900 444 1 703 908 218 0.476 63.108