Table 1.
Summary of organisms and major data types available in SilkPathDB
| No. of records |
||||||
|---|---|---|---|---|---|---|
| Microsporidia | Fungi | Bacteria | Virus | Host | Total | |
| Species | 5 | 3 | 49 | 29 | 4 | 90 |
| Assembly | 2457 | 359 | 49 | 59 | 52 004 | 54 928 |
| Gene | 12 995 | 31 703 | 277 369 | 3012 | 60 637 | 385 716 |
| mRNA | 12 995 | 31 703 | 271 267 | 3012 | 65 890 | 384 867 |
| Protein | 12 995 | 31 703 | 271 267 | 3012 | 65 890 | 384 867 |
| Transposon | 12 570 | 10 127 | 15 821 | 28 | 431 743 | 470 289 |
| Responsive gene | 4069 | 4069 | ||||
| GO | ||||||
| Molecular function | 331 | 951 | 7510 | 34 | 1048 | 9874 |
| Biological process | 275 | 764 | 25 047 | 24 | 919 | 27 029 |
| Cellular component | 106 | 248 | 3011 | 5 | 319 | 3689 |