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. Author manuscript; available in PMC: 2017 Jun 13.
Published in final edited form as: Behav Genet. 2011 Jan 5;41(1):77–89. doi: 10.1007/s10519-010-9434-1

Table 4.

KIAA0319 Francks haplotype with JA04 and 13 bp repeat

Haplotype—marker alleles
Haplotype frequency Transmission
rs4504469 rs2038137 JA04 rs71815143 rs2143340 Obs Exp. Var (O–E) χ2 p-value (1 d.f.)
2 (A) 2 (A) 14 (25 GT) 1 (ins) 1 (T) 0.060 22.903 16.952 5.2399 6.7599 0.0093
2 (A) 2 (A) 16 (27 GT) 1 (ins) 1 (T) 0.053 13 14.5 8.801 0.2556 0.6132
1 (G) 1 (C) 1 (11 GT) 2 (del) 1 (T) 0.147 39.861 46.366 21.501 1.9676 0.1607
1 (G) 1 (C) 2 (12 GT) 2 (del) 1 (T) 0.122 30.038 33.06 12.026 0.7598 0.3834
1 (G) 1 (C) 8 (18 GT) 2 (del) 2 (C) 0.095 28 30 13.575 0.2946 0.5873

Global χ2 (51 d.f.) = 112.45; p = 0.000002

χ2 on haplotypes with freq >10% (2 d.f.) = 3.1161; p = 0.2105

χ2 on haplotypes with freq >5% (5 d.f.) = 9.7402; p = 0.0829