Table 7.
Haplotype analysis of KIAA0319 5′ region
| Haplotype—marker alleles
|
Haplotype frequency | Transmission
|
|||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| rs6935076 | rs2038137 | JA04 | rs71815143 | rs3756821 | rs9461045 | Obs | Exp. | Var (O–E) | χ2 | p-value (1 d.f.) | |
| 2 (A) | 1 (C) | 1 (11 GT) | 2 (del) | 2 (A) | 1 (G) | 0.188 | 53 | 63.5 | 26.197 | 4.2085 | 0.0402 |
| 2 (A) | 1 (C) | 2 (12 GT) | 2 (del) | 2 (A) | 1 (G) | 0.144 | 49 | 52 | 20.073 | 0.4484 | 0.5031 |
| 1 (G) | 2 (A) | 14 (25 GT) | 1 (ins) | 1 (G) | 1 (G) | 0.078 | 33 | 23.5 | 8.7136 | 10.3570 | 0.0013 |
| 1 (G) | 2 (A) | 16 (27 GT) | 1 (ins) | 1 (G) | 1 (G) | 0.060 | 19 | 19.5 | 9.8129 | 0.0255 | 0.8731 |
| 1 (G) | 1 (C) | 8 (18 GT) | 2 (del) | 1 (G) | 2 (A) | 0.134 | 45 | 46.991 | 20.097 | 0.1972 | 0.6570 |
Global χ2 (38 d.f.) = 55.0060; p = 0.0366
χ2 on haplotypes with freq >5% (5 d.f.) = 11.62; p = 0.0404