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. 2017 Jun 13;7:3434. doi: 10.1038/s41598-017-03458-6

Table 2.

Bacterial identification results from 23 positive blood culture bottles based on culture and NGS of 16S-23S rRNA region.

Sample Patient Bottle Culture (Maldi-TOF MS) NGS of 16S-23S rRNA region (% of total reads)
BC01 Patient A anaerobic Escherichia coli Escherichia coli (100%)
BC02 Patient B aerobic Streptococcus dysgalactiae Streptococcus dysgalactiae (100%)
BC03 Patient C anaerobic Klebsiella oxytoca Klebsiella oxytoca (100%)
BC05 Patient D aerobic Staphylococcus heamolyticus Staphylococcus haemolyticus (100%)
BC06 Patient E anaerobic Staphylococcus hominis Staphylococcus hominis (100%)
BC07 Patient F aerobic Staphylococcus capitis Staphylococcus capitis (100%)
BC08 Patient G anaerobic Streptococcus pneumoniae Streptococcus pneumoniae (100%)
BC09 Patient H aerobic Staphylococcus epidermidis Staphylococcus epidermidis (100%)
BC10 Patient H anaerobic Staphylococcus hominis Staphylococcus hominis (100%)
BC11 Patient I anaerobic Bacteroides sp. Bacteroides fragilis (100%)
BC12 Patient J aerobic Staphylococcus hominis Staphylococcus hominis (100%)
BC13 Patient K aerobic Staphylococcus aureus Staphylococcus aureus (100%)
BC14 Patient L aerobic Klebsiella oxytoca Klebsiella oxytoca (100%)
BC15 Patient M anaerobic Streptococcus pneumoniae Streptococcus pneumoniae (100%)
BC16 Patient N aerobic Escherichia coli Escherichia coli (100%)
BC17 Patient O anaerobic Staphylococcus aureus Staphylococcus aureus (100%)
BC18 Patient P anaerobic Streptococcus pneumoniae Streptococcus pneumoniae (100%)
BC19 Patient Q aerobic Escherichia coli, Streptococcus infantis Escherichia coli (69.3%), Streptococcus lutetiensis (30.7%)
BC20 Patient Q anaerobic Escherichia coli Escherichia coli (100%)
BC21 Patient R aerobic Escherichia coli Escherichia coli (100%)
BC22 Patient R anaerobic Bacteroides vulgatus Bacteroides dorei (100%)
BC23 Patient S aerobic Staphylococcus hominis Staphylococcus hominis (100%)
BC24 Patient S aerobic Staphylococcus epidermidis Staphylococcus epidermidis (100%)