Table 1.
Summary of various CRISPR-Cas nucleases.
| Nuclease type | Enzyme name | WT/mutants | PAM | Protein size | Typical protospacer length | DNA end | Pros/Cons |
|---|---|---|---|---|---|---|---|
| Cas9 | SpCas9 | WT5 | 5′-NGG-3′ | 1,368 a.a. | 20 nt | blunt end | Most commonly used/Large protein size |
| VQR25 | 5′-NGAN-3′ | Different PAM specificities/Large protein size | |||||
| EQR25 | 5′-NGAG-3′ | ||||||
| VRER25 | 5′-NGCG-3′ | ||||||
| SaCas9 | WT15 | 5′-NNGRRT-3′ | 1,053 a.a. | Small protein size/Relatively strict PAM | |||
| KKH41 | 5′-NNNRRT-3′ | ||||||
| FnCas9 | WT43 | 5′-NGG-3′ | 1,629 a.a. | Less restrictive PAM/Large protein size, less application examples | |||
| RHA43 | 5′-YG-3′ | ||||||
| NmCas9 | WT69 | 5′-NNNNGATT-3′ | 1,082 a.a. | 24 nt | Small protein size/Strict PAM | ||
| St1Cas9 | WT70 | 5′-NNAGAAW-3′ | 1,121 a.a. | 20 nt | Small protein size/Strict PAM | ||
| BlatCas9 | WT42 | 5′-NNNNCNDD-3′ | 1,092 a.a. | 21 nt | Less restrictive PAM, small protein size/Less application examples | ||
| Cpf1 | AsCpf1 | WT44 | 5′-TTTN-3′ | 1,307 a.a. | 23 nt | sticky end | Various unique characteristics (see main text)/Strict PAM |
| LbCpf1 | WT44 | 5′-TTTN-3′ | 1,228 a.a. |