Table 3. Reproducibility of indel variants and single nucleotide variant (SNV) detection.

Sample: variant	Replicates			Expected variants			Called variants			Reproducibility, %
	1st batch	2nd batch	3rd batch	1st batch	2nd batch	3rd batch	1st batch	2nd batch	3rd batch
YMC1: BRCA1, c.5496_5506delinsA	1	1	3	1	1	3	1	1	3	100
YMC2: BRCA2, c.2798_2799del	1	1	3	1	1	3	1	1	3	100
YMC3: BRCA1, c.922_924delinsT	1	1	3	1	1	3	1	1	3	100
YMC1: 12 SNVs	1	1	3	12	12	36	12	12	36	100
YMC2: 13 SNVs	1	1	3	13	13	39	13	13	39	100
YMC3: 18 SNVs	1	1	3	18	18	54	18	18	54	100

SNV = single nucleotide variant; YMC = Yonsei Medical Center.