Table 4. Down-regulated genes, sorted by their absolute fold change.
| Rank | Probe Id | Gene symbol/Gene name | p-value | Log(Fold change) | Fold change |
|---|---|---|---|---|---|
| 1) | 17118180 | [CTGF]; BC087839 ENST00000367976NM_001901 | 1.203e-03 | -2.638 | -6.224 |
| 2) | 16703994 | [miscellaneous] AF269087 | 1.636e-02 | -1.523 | -2.874 |
| 4) | 17054115 | [miscellaneous] ENST00000443280 | 5.816e-03 | -1.488 | -2.805 |
| 5) | 17015324 | [NRN1] neuritin 1; BC042019ENST00000244766 ENST00000495850NM_016588 | 3.099e-03 | -1.466 | -2.763 |
| 6) | 17019543 | [C6orf223] AK097853; BC032706ENST00000336600 ENST00000439969ENST00000442114 ENST00000448947NM_001171992 NM_153246 | 2.770e-03 | -1.216 | -2.324 |
| 7) | 16660736 | [PNRC2] proline-rich nuclear receptor coactivator2; ENST00000471915 NM_017761 | 2.634e-02 | -1.216 | -2.323 |
| 8) | 17120368 | [miscellaneous] ENST00000416067 | 2.502e-02 | -1.198 | -2.294 |
| 9) | 16697217 | [RNU7-13P RNU7-41P] RNA, U7 small nuclear13 pseudogene; RNA, U7 small nuclear41 pseudogene; ENST00000515917ENST00000516413 | 1.844e-02 | -1.195 | -2.289 |
| 10) | 16793674 | [miscellaneous] ENST00000557163;NR_039985 | 1.521e-02 | -1.188 | -2.278 |
| 11) | 17123970 | [miscellaneous] ENST00000416067 | 3.461e-02 | -1.185 | -2.273 |
| 14) | 17120362 | [miscellaneous] ENST00000416067 | 2.616e-02 | -1.122 | -2.176 |
| 15) | 16961788 | [miscellaneous] ENST00000414084;ENST00000432729 | 1.915e-02 | -1.113 | -2.163 |
| 16) | 16956591 | [STX19] syntaxin 19; BC034696ENST00000315099 NM_001001850 | 1.506e-03 | -1.068 | -2.097 |
| 17) | 17094355 | [miscellaneous] XM_002342917 | 1.453e-03 | -1.066 | -2.094 |
| 18) | 16843998 | [miscellaneous] BX647429 | 3.099e-03 | -1.064 | -2.090 |
| 20) | 16989736 | [EGR1] early growth response 1;ENST00000239938 ENST00000411801ENST00000535792 M62829 NM_001964 | 5.112e-03 | -1.058 | -2.082 |
| 21) | 16766287 | [SNORD59A] small nucleolar RNA, C/D box59A; NR_002737 | 3.453e-02 | -1.054 | -2.076 |
| 22) | 16846081 | [miscellaneous] ENST00000575039;NM_001195192 | 2.877e-02 | -1.038 | -2.053 |
| 23) | 16702501 | [miscellaneous] ENST00000466451;ENST00000495368 | 3.861e-02 | -1.024 | -2.033 |
| 24) | 16702226 | [DKFZp667F0711]; AL713753 | 4.110e-03 | -1.014 | -2.019 |
| 25) | 17123566 | [miscellaneous] ENST00000416067 | 1.891e-03 | -1.009 | -2.013 |
| 26) | 16728883 | [miscellaneous] ENST00000426191;ENST00000538227 | 2.507e-02 | -1.007 | -2.010 |
Genes down-regulated in BT474 1986 cells compared to BT474 ATCC cells. Rank indicating position in all differently expressed genes, sorted by absolute fold change.