Table 3.
Kinetic parameters for binding of bNAb VRC01, bNAb b12, sCD4, and GL-VRC01 with full-length WT gp120, ODEC, and ΔG14-ODEC as determined by SPR studies
kon is association rate; koff is dissociation rate; KD is equilibrium dissociation constant determined using SPR; S.D. is standard deviation for the data from two independent experiments; bNAb is broadly neutralizing antibody; GL is germline. ODEC and ΔG14-ODEC were purified from E. coli.
| Ligand | Analyte | kon | koff | KD ±S.D. |
|---|---|---|---|---|
| m−1 s−1 | s−1 | nm | ||
| VRC01 | WT gp120 | 3.3 × 104 | 8.7 × 10−4 | 26 ± 5 |
| ODEC | 3.7 × 104 | 1.3 × 10−2 | 359 ± 55 | |
| ΔG14-ODEC | 5.6 × 104 | 3.83 × 10−3 | 47 ± 17 | |
| b12 | WT gp120 | 3.5 × 104 | 1.7 × 10−3 | 49 ± 5 |
| ODEC | 1.7 × 104 | 2.7 × 10−3 | 153 ± 17 | |
| ΔG14-ODEC | 1.1 × 105 | 1.8 × 10−3 | 16 ± 1 | |
| sCD4 | WT gp120 | 2.3 × 104 | 3.3 × 10−4 | 15 ± 4 |
| ODEC | 1.9 × 104 | 4.2 × 10−3 | 219 ± 11 | |
| ΔG14-ODEC | 1.1 × 105 | 1.5 × 10−3 | 15 ± 3 | |
| GL-VRC01 | WT gp120 | –a | –a | –a |
| ODEC | 3.3 × 105 | 1.3 × 10−3 | 4 ± 1 | |
| ΔG14-ODEC | 1.4 × 105 | 1.2 × 10−3 | 9 ± 2 |
a No detectable binding was noted.