TABLE 3.
Geographic distribution of allelesa
| Location | No. (%) of alleles | Change(s) in sequence from wild type
|
||
|---|---|---|---|---|
| Mutation(s)
|
Indel | |||
| Nonsynonymous | Synonymous | |||
| Wosera | 17 (89.5) | None | None | None |
| 1 (5.3) | None | None | Insertion D | |
| 1 (5.3) | 57L/58R | None | Insertion A | |
| Liksul | 12 (48.0) | None | None | None |
| 6 (24.0) | 57L/58R | 38GGC | None | |
| 2 (8.0) | 58R | None | None | |
| 2 (8.0) | None | 215CGA | None | |
| 1 (4.0) | None | None | Insertion A | |
| 1 (4.0) | None | None | Deletion B | |
| 1 (4.0) | 199V | None | None | |
| Papua | 8 (29.6) | 57L/58R/61M/117T | None | None |
| 7 (25.9) | 58R/117N | None | None | |
| 4 (14.8) | None | None | None | |
| 4 (14.8) | 58R/117N/199V | None | None | |
| 1 (3.7) | 117N | None | Insertion C | |
| 1 (3.7) | 58R/61M/117T | None | None | |
| 1 (3.7) | 57L/58R/117T | None | None | |
| 1 (3.7) | 49R/57L/58R/61M/117T | None | None | |
| Gag | 5 (62.5) | None | None | None |
| 2 (25.0) | None | None | Insertion B | |
| 1 (12.5) | 58R/117N | 196ATA | None | |
| Legundi | 5 (41.7) | 58R/117N | None | None |
| 5 (41.7) | 58R/117N | None | Deletion A | |
| 1 (8.3) | None | None | Insertion C | |
| 1 (8.3) | None | None | Deletion B | |
| Central Java | 11 (50.0) | 58R/117N | None | Deletion A |
| 5 (22.7) | 58R/117N | None | None | |
| 2 (9.1) | None | None | None | |
| 1 (4.5) | None | None | Insertion A | |
| 1 (4.5) | 58R/117N/99S | None | None | |
| 1 (4.5) | 15S/57L/117T/173F | None | None | |
| 1 (4.5) | 57L/111L/117T/173F | None | None | |
| Flores Kali- mantan | 8 (100) | None | None | None |
| 7 (43.8) | 57L/111L/117T/173F | None | None | |
| 3 (18.8) | None | None | None | |
| 2 (12.5) | None | None | Deletion A | |
| 2 (12.5) | 57L/58R/61M/117T* | None | None | |
| 1 (6.3) | 58R/117N | None | None | |
| 1 (6.3) | 58R/117N/199V | None | None | |
a
The starred allele derived from a single sample from South Kalimantan and a sample from Ketapang, West Kalimantan.