Table 3.
Pairwise Overlap of Genes Implicated by the GWAS, Two Fine-Mapping Methods, eQTL and mQTL Analyses
GWAS | Fine-Mapping | eQTL | mQTL | Total Genes | Unique Genes | |
---|---|---|---|---|---|---|
GWAS | 99 | 13 | 8 | 41 | 99 | 49 (49.5%) |
Fine-mapping | 13 | 24 | 2 | 9 | 24 | 8 (33.3%) |
eQTL | 8 | 2 | 19 | 9 | 19 | 6 (31.6%) |
mQTL | 41 | 9 | 9 | 211 | 211 | 162 (76.8%) |
283 | 225 (79.5%) |
Closest protein-coding genes identified by the GWAS and the two fine-mapping methods CAVIARBF and PRFScore, and genes identified by the eQTL and mQTL analyses.