Table 3.
Differentially expressed human genes between health and periodontitis in periodontal pockets.
| Gene symbol | log2FC | log2CPM | Annotation |
|---|---|---|---|
| ANKRD30BL | 9.07 | 11.31 | ankyrin repeat domain 30B-like |
| NPM1P35 | 5.49 | 4.94 | nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 35 |
| LOC105374556 | 5.04 | 4.78 | uncharacterized LOC105374556 |
| ATAD2 | 3.81 | 6.71 | ATPase family AAA domain-containing protein 2 (EC 3.6.1.3) (AAA nuclear coregulator cancer-associated protein) (ANCCA) |
| NPM1P4 | 6.15 | 3.51 | nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 4 |
| LOC101930010 | 5.62 | 6.28 | uncharacterized LOC101930010 |
| ENO3 | 4.42 | 3.50 | Beta-enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (Enolase 3) (Muscle-specific enolase) (MSE) (Skeletal muscle enolase) |
| MT-TP | 4.62 | 4.45 | mitochondrially encoded tRNA proline |
| RNA18SP2 | 6.24 | 3.71 | RNA, 18S ribosomal pseudogene 2 |
| NPM1P31 | 4.16 | 4.12 | nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 31 |
| NPM1P24 | 5.52 | 4.00 | nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 24 |
| SSR4 | 4.31 | 3.08 | Translocon-associated protein subunit delta (TRAP-delta) (Signal sequence receptor subunit delta) (SSR-delta) |
| HMGB1P10 | 4.28 | 4.46 | high mobility group box 1 pseudogene 10 |
| FTL | 2.38 | 7.30 | Ferritin light chain (Ferritin L subunit) |
Reads were mapped against the human reference genome (ver. GRCh38) to investigate the response of the host. The table lists the differentially expressed host genes calculated by edgeR.