Table 1.
Performance of Chemicals and Drugs lexicon.
Dataset | True positive | False positive | False negative | FP1 | Precision | Recall | F-score | P1 | F1 | |
---|---|---|---|---|---|---|---|---|---|---|
Training (Cross validation) | DrugBank | 11,051 | 2,060 | 932 | 373 | 0.84 | 0.92 | 0.88 | 0.97 | 0.94 |
MedLine | 1,372 | 484 | 335 | 6 | 0.74 | 0.80 | 0.77 | 1.00 | 0.89 | |
Overall | 12,423 | 2,544 | 1,267 | 379 | 0.83 | 0.91 | 0.87 | 0.97 | 0.94 | |
Test | DrugBank | 279 | 61 | 17 | 46 | 0.82 | 0.94 | 0.88 | 0.86 | 0.90 |
MedLine | 288 | 191 | 58 | 34 | 0.60 | 0.83 | 0.70 | 0.89 | 0.86 | |
Overall | 567 | 252 | 75 | 80 | 0.69 | 0.88 | 0.78 | 0.88 | 0.88 |