Table 1. Summary of sequence assembly using Illumina sequencing.
Sequence | Items | Value |
---|---|---|
Reads | Total raw reads | 110,834,050 |
Total clean reads | 104,021,494 | |
Total clean nucleotides (nt) | 9,361,934,460 | |
Q20 percentage (%) | 97.55 | |
N percentage (%) | 0 | |
GC percentage (%) | 45.43 | |
Contig | Total number | 94,546 |
Total length (nt) | 46,012,409 | |
Mean length (nt) | 487 | |
Contig N50 (nt) | 1,075 | |
Unigene | Total number | 91,449 |
Total length (nt) | 148,176,175 | |
Mean length (nt) | 1,620 | |
Unigene N50 (nt) | 2,389 | |
Distinct clusters | 55,888 | |
Distinct singletons | 35,561 |