Table 1.
Length of | Length of | Length of | No. of | No. of | No. of | No. of | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Genome | Length | Length | Length | Length | coding | protein coding | non-coding | GC | unique | unique | unique | unique | |
Species | size | of LSC | of SSC | of IRA | of IRB | sequence (%) | sequence (%) | sequence | (%) | gene | CDS | tRNA | rRNA |
Salix tetrasperma# | 155671 | 84584 | 16291 | 27398 | 27398 | 91593 (58.84) | 80115 (51.47) | 64078 | 36.7 | 113 | 77 | 30 | 4 |
S. babylonica# | 155246 | 84516 | 15830 | 27450 | 27450 | 90483 (58.28) | 79005 (50.89) | 64763 | 36.6 | 112 | 76 | 30 | 4 |
S. oreinoma# | 155531 | 84470 | 16213 | 27424 | 27424 | 92026 (59.17) | 80187 (51.56) | 63505 | 36.7 | 113 | 77 | 30 | 4 |
S. interior∗ | 156620 | 85980 | 16308 | 27166 | 27166 | 91738 (58.57) | 80079 (51.13) | 64882 | 37.0 | 113 | 77 | 30 | 4 |
S. purpurea∗ | 155590 | 84452 | 16220 | 27459 | 27459 | 92014 (59.14) | 80175 (51.53) | 63576 | 36.7 | 113 | 77 | 30 | 4 |
S. suchowensis∗ | 155214 | 84077 | 16221 | 27458 | 27458 | 92014 (59.28) | 80175 (51.65) | 63200 | 36.7 | 113 | 77 | 30 | 4 |
Populus alba∗ | 156505 | 84618 | 16567 | 27660 | 27660 | 92467 (59.08) | 80628 (51.52) | 64038 | 36.7 | 113 | 77 | 30 | 4 |
P. balsamifera∗ | 157094 | 84922 | 16499 | 27846 | 27827 | 92542 (58.91) | 80703 (51.37) | 64552 | 36.7 | 113 | 77 | 30 | 4 |
P. euphratica∗ | 156766 | 84887 | 16589 | 27644 | 27646 | 92406 (58.95) | 80568 (51.39) | 64360 | 36.7 | 113 | 77 | 30 | 4 |
P. fremontii∗ | 157446 | 85454 | 16318 | 27837 | 27837 | 92575 (58.80) | 80736 (51.28) | 64871 | 36.7 | 113 | 77 | 30 | 4 |
P. tremula∗ | 156067 | 84377 | 16490 | 27600 | 27600 | 92473 (59.25) | 80634 (51.67) | 63594 | 36.8 | 113 | 77 | 30 | 4 |
P. yunnanensis∗ | 155776 | 83955 | 16549 | 27636 | 27636 | 91404 (58.68) | 79565 (51.08) | 64372 | 36.8 | 113 | 77 | 30 | 4 |
P. cathayana∗ | 155449 | 83911 | 16488 | 27525 | 27525 | 92423 (59.46) | 80584 (51.84) | 63026 | 36.9 | 113 | 77 | 30 | 4 |
P. trichocarpa∗ | 157033 | 85129 | 16600 | 27652 | 27652 | 92440 (58.87) | 80601 (51.33) | 64593 | 36.7 | 113 | 77 | 30 | 4 |
Sequence lengths are measured by bp. #cp genome sequenced in this study. ∗cp genomes of Salicaceae are available in GenBank.