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. Author manuscript; available in PMC: 2017 Jun 20.
Published in final edited form as: Nat Methods. 2016 Apr 25;13(6):489–492. doi: 10.1038/nmeth.3840

Figure 2.

Figure 2

irCLIP produces high-quality data sets with greatly reduced cellular inputs, (a) Pearson correlations of RT stops between biological replicates of hnRNP-C irCLIP of the indicated number of cells per immunoprecipitation. (b) Histogram of the unique read fractions of the hnRNP-C irCLIP and iCLIP biological replicates, (c) Top HOMER motif identified for all significant hnRNP-C clusters from the indicated data set. (d) Comparison of significant (FDR < 0.05) hnRNP-C, PTBP1, and HuR clusters identified with irCLIP at the PKM locus. Alt., alternate. Green, irCLIP; blue, iCLIP.