Table 1.

Viruses detected in this study by metagenomics analysis (NGS) of fecal samples from Iberian wolves and domestic dogs in South of Douro region

	Viral family	Feral dog pool	Wolf pool 1	Wolf pool 2	Pet dog pool 1	Pet dog pool 2
Number of reads blasted		4,003,381	3,272,882	2,874,956	4,501,170	4,115,523
Number of viral reads		939,118	911,359	417,65	350,114	250,733
Bacteriophage reads	Caudovirales and Microviridae	580,772	606,791	136,777	5464	208,79
Densovirusa	Parvoviridae		6876	206,174
Parvovirusa	Parvoviridae		7279	28
Dependoparvovirus	Parvoviridae	3990
Fesa‐like virus	Unassigned		265	81		1573
Kobuvirus	Picornaviridae		189
Nodavirusa	Nodaviridae	293
Mimivirus	Mimiviridae	742
Totivirus	Totiviridae	1051	431
Circularviruses	Circoviridae		1,013,048	28757
Bocavirusa	Parvoviridae		25,418		342,576
Canine distemper virusa	Paramyxoviridae		1130
Gemycircularvirusa	Mycodnaviridae		103		494
Picobirnavirusb	Picobirnaviridae		67
Negevirus	Unassigned			591
Tobamovirus	Virgaviridae					23,956

^aVirus characterized in further detail in this manuscript.

^bReported elsewhere (Conceição‐Neto, Mesquita, et al., 2016).