Table 3.
Microsatellite markers for the genus Cichorium
| Locus | NCBI sequence | Alleles | Repeat motif in library | Primer sequence (5′–3′) | Size range (bp) |
|---|---|---|---|---|---|
| 5291 | CCIL5291.b1_F04.ab1 | 24 | (AAG)16 | F: M13‐GCATCCACTCAAGCTCATTG | 156–273 |
| R: TGGATTTCTAGGCCACACCT | |||||
| 3984 | CCIM3984.b1_P11.ab1 | 8 | (AAG)11 | F: M13‐GCAGCAACAACCCTTTCTTT | 204–225 |
| R: GGTGGCGATTGAATTGAAGA | |||||
| 5055 | CCIS5055.b1_M15.ab1 | 15 | (CAA)10 | F: M13‐TGTGAGACGTGGGATTCTGA | 213–291 |
| R: GCTTTGGCTCCCTATGTCAC | |||||
| 12770 | CCIM12770.b1_D01.ab1 | 15 | (CTT)18 | F: M13‐ CATAAAGGCCCTCCATTCCAC | 168–237 |
| R: GTAAAGCCAAGCGAGACAGG | |||||
| 6865 | CCIL6865.b1_B14.ab1 | 10 | (GAT)10 | F: M13‐AAATGGTTCTGCATCAAAGGA | 231–258 |
| R: CGATGGGGCTTGTTTCTTTA | |||||
| 1385 | CCIL1385.b1_A12.ab1 | 26 | (GAT)11 | F: M13‐TTGCCTCTTGCTCCAATACC | 144–225 |
| R: GGGTCCCTTTGTGTCATCAT | |||||
| 11019 | CCEL11019.b1_E20.ab1 | 11 | (ATTA)5 | F: M13‐CAATCGGTTAATCAATCAAATCAA | 219–291 |
| R: GGTATCGTAAGCCAGCCAAA | |||||
| 13676 | CCEL13676.b1_G12.ab1 | 14 | (CAC)10 | F: M13‐TCAACGTGCTTCAAGACGAC | 225–270 |
| R: GTGGTGGTGGTTCGACTTTT | |||||
| 2050 | CCIS2050.b1_D09.ab1 | 9 | (CTT)10 | F: M13‐GCAACGGATGAAGGGTTACA | 186–210 |
| R: GGAAATTAACCCCGGAAAAA | |||||
| 3899 | CCEL3899.b1_E15.ab1 | 9 | (AATC)5 | F: M13‐CCTCGACAGAAAACCCTCTTC | 207–228 |
| R: AGGTGCGGAAGCGTAAGTT | |||||
| 7179 | CCIS7179.b1_E20.ab1 | 11 | (CTT)10 | F: M13‐GGCAGGACGTCTTTTTGGTA | 186–225 |
| R: CCGAAGAATTTGAGGTTTG | |||||
| 8271 | CCEM8271.b1_M04.ab1 | 10 | (ATG)11 | F: M13‐AACAATGGTGGGCAGAAAAC | 156–201 |
| R: CAGGGGTAAATCGGGAAAAT |