Table 3. ACP proteins with antiparallel patterns of regulation between the transcriptome and proteome.
| Protein accession1 | Protein GI2 | Annotation3 | Log2Fold Change4 CLas+/CLas- | |
|---|---|---|---|---|
| RNAseq | Proteomics | |||
| XP_008479572.1 | 662185929 | collagen alpha-5(IV) chain | 0.58 | -2.87 |
| XP_008467803.1 | 662190109 | UDP-glucuronosyltransferase 2B7-like | 0.60 | -2.08 |
| XP_008471666.1 | 662197199 | putative tricarboxylate transport protein, mitochondrial | 0.55 | -2.11 |
| XP_008477908.1 | 662208689 | probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550, partial | 1.00 | -2.46 |
| XP_008478719.1 | 662210178 | probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 | 2.31 | -1.17 |
| XP_008479475.1 | 662211562 | proline dehydrogenase 1, mitochondrial | 0.60 | -1.07 |
| XP_008470971.1 | 662195929 | vigilin-like | -0.52 | 0.86 |
| XP_008471536.1 | 662196964 | eukaryotic translation initiation factor 4B, partial | -0.78 | 0.65 |
| XP_008485792.1 | 662223032 | basic salivary proline-rich protein 2-like, partial | -0.62 | 1.31 |
1 Accession for corresponding protein in NCBI
2 Protein GI found in NCBI
3 Annotation for corresponding protein/transcript from NCBI
4 Number of transcripts or proteins with a p value of <0.05 after a Wald/exact test (transcripts) or Fisher’s exact test (proteins) and with a CLas+/CLas- Log2 fold change of ±0.5