TABLE 1.
Summary of toxins and virulence determinants in different V. parahaemolyticus strains analyzed in this study
| Strain type | Origina | Strain name | PirAvp/PirBvp | T3SS1 | T3SS2 | TDH/TRH | T6SS1 | T6SS2 | Yr isolatedb | Associated with disease | Accession number(s) | Reference or source |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Clinical | JP | RIMD2210633 | − | + | + | + | + | + | 1996 | + | NC_004603, NC_004605 | 61 |
| Non-AHPND | VT | A2 | − | + | − | − | − | + | 2013 | − | MWVH00000000 | This study |
| TH | TUMSAT_H01_S4 | − | + | − | − | − | + | 2014 | − | BAVI00000000 | 62 | |
| TUMSAT_H10_S6 | − | + | − | − | − | + | 2014 | − | BAVK00000000 | 62 | ||
| NCKU_TN_S02 | − | + | − | − | − | + | 2014 | − | JPKV00000000 | 63 | ||
| MX | FIM-S1392− | − | + | − | − | − | + | 2014 | − | JPLU00000000 | 64 | |
| AHPND | VT | A3 | + | + | − | − | + | + | 2014 | + | NZ_JOKE00000000 | 65 |
| 1335 | + | + | − | − | + | + | 2013 | + | MYFF00000000 | This study | ||
| 12297B | + | + | − | − | + | + | 2013 | + | MYFG00000000 | This study | ||
| TH | TUMSAT_DE1_S1 | + | + | − | − | + | + | 2014 | + | BAVF00000000 | 62 | |
| TUMSAT_DE2_S2 | + | + | − | − | + | + | 2014 | + | BAVG00000000 | 62 | ||
| TUMSAT_D06_S3 | + | + | − | − | + | + | 2014 | + | BAVH00000000 | 62 | ||
| NCKU_TV_3HP | + | + | − | − | + | + | 2014 | + | JPKS00000000 | 63 | ||
| NCKU_TV_5HP | + | + | − | − | + | + | 2014 | + | JPKT00000000 | 62 | ||
| CN | NCKU_CV_CHN | + | + | − | − | + | + | 2014 | + | JPKU00000000 | 63 | |
| MX | D4 | + | + | − | − | + | + | 2013 | + | MYFH00000000 | This study | |
| M0605 | + | + | − | − | + | + | 2013 | + | JALL00000000 | 4 | ||
| FIM-S1708+ | + | + | − | − | + | + | 2014 | + | JPLV00000000 | 64 |
a
JP, Japan; VT, Vietnam; TH, Thailand; MX, Mexico; CN, China.
b
As best can be inferred from references.