Table 3.
EdgeR determined significantly differentially expressed transcripts by treatment group in P. eremicus testes. Of the 66 total DTE, 45 were significantly more highly expressed in WET mice (High in WET) and 21 were more highly expressed in DRY mice (High in DRY). BLASTn matches to Ensembl IDs and corresponding Gene IDs are provided (Gene)
| Transcript ID | log2FC | logCPM | FDR | Ensembl ID | Gene |
|---|---|---|---|---|---|
| HIGH: WET | |||||
| BINPACKER.15365.1 | −3.703 | 0.047 | 5.31E-11 | ENSMUSG00000054200.6 | Ffar4 |
| BINPACKER.2960.1 | −4.268 | 1.147 | 2.06E-09 | ENSMUSG00000079019.2 | Insl3 |
| BINPACKER.17981.2 | −2.975 | 0.436 | 6.29E-08 | ENSMUSG00000026435.15 | Slc45a3 |
| BINPACKER.9961.2 | −2.426 | 1.998 | 7.50E-07 | ENSMUSG00000031170.14 | Slc38a5 |
| BINPACKER.3452.1 | −2.507 | -0.140 | 3.56E-06 | no match | - |
| BINPACKER.724.4 | −2.162 | 2.667 | 8.32E-06 | ENSMUSG00000032554.15 | Trf |
| BINPACKER.9604.1 | −2.582 | 0.547 | 7.87E-05 | no match | - |
| BINPACKER.31087.1 | −2.908 | -0.858 | 9.74E-05 | no match | - |
| BINPACKER.24398.1 | −2.440 | -0.689 | 9.74E-05 | ENSMUSG00000036596.6 | Cpz |
| BINPACKER.9726.1 | −3.474 | -0.107 | 2.38E-04 | ENSMUSG00000026435.15 | Slc45a3 |
| BINPACKER.9218.3 | −1.578 | 1.525 | 2.76E-04 | ENSMUSG00000021253.6 | Tgfb3 |
| BINPACKER.18534.1 | −2.332 | 1.346 | 4.85E-04 | ENSMUSG00000025020.11 | Slit1 |
| BINPACKER.17022.3 | −2.899 | -0.561 | 1.00E-03 | no match | - |
| BINPACKER.13806.1 | −2.442 | -0.381 | 1.13E-03 | ENSMUSG00000025172.2 | Ankrd2 |
| BINPACKER.7740.1 | −2.790 | 1.095 | 1.13E-03 | ENSMUSG00000057074.6 | Ces1g |
| BINPACKER.10034.2 | −4.420 | 0.387 | 1.23E-03 | ENSMUSG00000026516.8 | Nvl |
| BINPACKER.11560.2 | −1.465 | 2.050 | 1.66E-03 | ENSMUSG00000021913.7 | Ogdhl |
| BINPACKER.13701.1 | −1.312 | 1.804 | 2.28E-03 | ENSMUSG00000025648.17 | Pfkfb4 |
| BINPACKER.3510.3 | −2.163 | 0.906 | 2.95E-03 | ENSMUSG00000027822.16 | Slc33a1 |
| BINPACKER.15806.1 | −1.700 | 1.062 | 3.39E-03 | ENSMUSG00000015702.13 | Anxa9 |
| BINPACKER.17992.1 | −2.542 | 0.653 | 3.39E-03 | ENSMUSG00000030830.18 | Itgal |
| BINPACKER.9726.2 | −2.119 | 0.560 | 3.48E-03 | ENSMUSG00000026435.15 | Slc45a3 |
| BINPACKER.6383.3 | −2.093 | 1.270 | 4.16E-03 | ENSMUSG00000002109.14 | Ddb2 |
| BINPACKER.20716.2 | −4.204 | -0.566 | 5.75E-03 | ENSMUSG00000013846.9 | St 3 gal1 |
| BINPACKER.20114.1 | −1.661 | 0.501 | 5.97E-03 | ENSMUSG00000030972.6 | Acsm5 |
| BINPACKER.18622.1 | −1.645 | 1.704 | 6.36E-03 | no match | - |
| BINPACKER.24914.1 | −2.211 | -0.159 | 9.83E-03 | ENSMUSG00000003555.7 | Cyp17a1 |
| BINPACKER.31815.1 | −1.905 | -0.770 | 9.83E-03 | no match | - |
| BINPACKER.6740.3 | −3.090 | -0.434 | 1.04E-02 | no match | - |
| BINPACKER.20530.1 | −1.626 | 0.545 | 1.12E-02 | ENSMUSG00000038463.8 | Olfml2b |
| BINPACKER.20656.1 | −1.910 | -0.531 | 1.22E-02 | ENSMUSG00000029373.7 | Pf4 |
| BINPACKER.4855.1 | −1.340 | 4.025 | 1.23E-02 | ENSMUSG00000059991.7 | Nptx2 |
| BINPACKER.1846.1 | −3.280 | -0.792 | 1.23E-02 | no match | - |
| BINPACKER.6494.2 | −3.363 | 0.029 | 1.26E-02 | ENSMUSG00000052861.13 | Dnah6 |
| BINPACKER.1818.1 | −1.713 | 3.289 | 2.03E-02 | ENSMUSG00000024125.1 | Sbpl |
| BINPACKER.10743.2 | −1.915 | -0.525 | 2.06E-02 | ENSMUSG00000041607.16 | Mbp |
| BINPACKER.13054.2 | −1.147 | 2.697 | 2.06E-02 | ENSMUSG00000022994.8 | Adcy6 |
| BINPACKER.6807.1 | −1.330 | 2.106 | 2.13E-02 | ENSMUSG00000046687.5 | Gm5424 |
| BINPACKER.14160.1 | −2.051 | 0.603 | 2.86E-02 | ENSMUSG00000041556.8 | Fbxo2 |
| BINPACKER.16191.1 | −1.431 | 0.926 | 3.42E-02 | ENSMUSG00000028654.13 | Mycl |
| BINPACKER.10141.3 | −3.283 | -1.191 | 3.68E-02 | ENSMUSG00000024132.5 | Eci1 |
| BINPACKER.23790.1 | −1.756 | -0.275 | 4.51E-02 | ENSMUSG00000001119.7 | Col6a1 |
| BINPACKER.22521.1 | −1.841 | -0.056 | 4.52E-02 | ENSMUSG00000054083.8 | Capn12 |
| BINPACKER.1061.6 | −1.807 | 1.943 | 4.93E-02 | no match | - |
| BINPACKER.17734.1 | −1.660 | 2.109 | 4.94E-02 | ENSMUSG00000049608.8 | Gpr55 |
| HIGH: DRY | |||||
| BINPACKER.21794.1 | 2.434 | 3.117 | 4.41E-08 | ENSMUSG00000020427.11 | Igfbp3 |
| BINPACKER.28731.1 | 2.484 | 1.634 | 4.41E-08 | no match | - |
| BINPACKER.5662.4 | 2.061 | 2.419 | 1.32E-07 | ENSMUSG00000019997.11 | Ctgf |
| BINPACKER.87639.1 | 2.682 | 0.345 | 1.96E-07 | ENSMUSG00000001768.15 | Rin2 |
| BINPACKER.35470.1 | 2.367 | 1.786 | 1.89E-04 | no match | - |
| BINPACKER.52106.1 | 2.096 | -0.542 | 6.83E-04 | no match | - |
| BINPACKER.3957.3 | 6.309 | 1.579 | 1.02E-03 | ENSMUSG00000019988.6 | Nedd1 |
| BINPACKER.116235.1 | 2.212 | 0.301 | 3.94E-03 | no match | - |
| BINPACKER.4449.4 | 3.428 | -0.538 | 6.74E-03 | ENSMUSG00000005150.16 | Wdr83 |
| BINPACKER.28.2 | 4.183 | 2.295 | 1.05E-02 | ENSMUSG00000075706.10 | Gpx4 |
| BINPACKER.56553.1 | 1.472 | 0.172 | 1.46E-02 | no match | - |
| BINPACKER.93518.1 | 1.711 | -0.793 | 1.57E-02 | no match | - |
| BINPACKER.11512.1 | 1.187 | 3.654 | 1.70E-02 | ENSMUSG00000031591.14 | Asah1 |
| BINPACKER.66588.1 | 1.851 | -0.347 | 1.71E-02 | no match | - |
| BINPACKER.42718.1 | 1.542 | 0.507 | 2.06E-02 | ENSMUSG00000030790.15 | Adm |
| BINPACKER.49203.1 | 1.639 | -0.035 | 2.44E-02 | no match | - |
| BINPACKER.147548.1 | 1.744 | -0.007 | 2.99E-02 | ENSMUSG00000042757.15 | Tmem108 |
| BINPACKER.23756.2 | 1.265 | 3.468 | 3.01E-02 | ENSMUSG00000022061.8 | Nkx3–1 |
| BINPACKER.12709.1 | 3.906 | 2.611 | 3.01E-02 | ENSMUSG00000028639.14 | Ybx1 |
| BINPACKER.5280.2 | 3.874 | 0.257 | 3.76E-02 | ENSMUSG00000074582.10 | Arfgef2 |
| BINPACKER.58702.1 | 1.780 | -0.500 | 4.93E-02 | no match | - |