Table 2. Summary statistics of the transcriptome sequencing.
Patient | Differentiation grade | Sample Type | Total reads | Mapped reads | Total base (bp) | Mapped base (bp) | Mappping ratio | Coverage (X) |
---|---|---|---|---|---|---|---|---|
P1 | Poorly | T | 35,930,408 | 33,819,287 | 4,491,301,000 | 4,227,410,875 | 94.12% | 33 |
N | 34,902,228 | 32,863,973 | 4,362,778,500 | 4,107,996,625 | 94.16% | 32 | ||
P2 | Poorly | T | 35,315,378 | 33,125,921 | 4,414,422,250 | 4,140,740,125 | 93.80% | 32 |
N | 34,383,802 | 32,279,443 | 4,297,975,250 | 4,034,930,375 | 93.88% | 31 | ||
P3 | Poorly | T | 35,532,658 | 33,258,212 | 4,441,582,250 | 4,157,276,500 | 93.60% | 32 |
N | 34,537,914 | 32,152,860 | 4,317,239,250 | 4,019,107,500 | 93.09% | 31 | ||
M1 | Moderately | T | 34,566,526 | 32,670,216 | 4,320,815,750 | 4,083,777,000 | 94.51% | 31 |
N | 35,384,486 | 33,407,169 | 4,423,060,750 | 4,175,896,125 | 94.41% | 32 | ||
M2 | Moderately | T | 34,564,642 | 32,385,294 | 4,320,580,250 | 4,048,161,750 | 93.69% | 31 |
N | 34,771,048 | 32,792,475 | 4,346,381,000 | 4,099,059,375 | 94.31% | 32 | ||
M3 | Moderately | T | 35,371,920 | 32,571,695 | 4,421,490,000 | 4,071,461,875 | 92.08% | 31 |
N | 35,959,532 | 32,990,753 | 4,494,941,500 | 4,123,844,125 | 91.74% | 32 | ||
W1 | Well | T | 34,762,386 | 32,701,011 | 4,345,298,250 | 4,087,626,375 | 94.07% | 31 |
N | 35,314,918 | 33,021,170 | 4,414,364,750 | 4,127,646,250 | 93.50% | 32 | ||
W2 | Well | T | 35,610,444 | 32,509,118 | 4,451,305,500 | 4,063,639,750 | 91.29% | 31 |
N | 34,637,398 | 31,280,461 | 4,329,674,750 | 3,910,057,625 | 90.31% | 30 | ||
W3 | Well | T | 42,279,434 | 39,097,967 | 5,284,929,250 | 4,887,245,875 | 92.50% | 38 |
N | 40,083,384 | 36,852,292 | 5,010,423,000 | 4,606,536,500 | 91.90% | 35 | ||
Average | 35,772,695 | 33,321,073 | 4,471,586,847 | 4,165,134,146 | 93.17% | 32 |
Note: T and N represent tumor and adjacent non-tumor tissue, respectively.