TABLE 1.
Discrepancies in Oxford MLST (gltA-gyrB-gdhB-recA-cpn60-gpi-rpoD)
| Strain(s) | GCa | ST by original PCR methodb | Reference(s) | ST determined in silico from genomesb | Reference |
|---|---|---|---|---|---|
| A1, G7, A297, WM98 | 1 | 109 (10-12-4-11-4-9-5) | 8–11 | 231 (10-12-4-11-4-98-5) | 12 |
| D36 | 1 | 247 (10-12-4-11-4-58-5) | 13–15 | 498 (10-12-4-11-4-142-5) | 12 |
| D78, D81 | 1 | 347 (10-12-4-11-4-80-5) | 12 | 441 (10-12-4-11-4-100-5) | 12 |
| A85 | 1 | 126 (10-53-4-11-4-64-5) | 13–15 | 781 (10-53-4-11-4-200-5) | 12 |
| A91, WM99c | 2 | 92 (1-3-3-2-2-7-3) | 5, 6, 16 | 208 (1-3-3-2-2-97-3) | 17 |
| RBH44 | 2 | 69 (1-46-3-2-2-58-3) | 18 | 423 (1-46-3-2-2-142-3) | This study |
| A320 | 2 | 98 (1-12-3-2-2-3-3) | 19 | 350 (1-12-3-2-2-102-3) | This study |
| D46 | 110 (1-15-2-28-1-52-32) | 9 | 229 (1-15-2-28-1-107-32) | This study | |
| RBH2 (F2) | 125 (1-52-59-12-1-18-44) | 9 | 1134 (1-52-59-12-1-79-44) | This study | |
| RCH51 | 253 (1-52-29-28-18-24-7) | 9 | 514 (1-52-29-28-18-114-7) | This study |
a
Global clones.
b
Discrepancies are in bold type.