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Classification of valid reads from cDNA libraries constructed using CSD-symptomatic and asymptomatic citrus treesa
| Category | Total no. of valid reads | % of valid reads |
|---|---|---|
| CTV | 53,545 | 87.01 |
| Citrus mRNA | 4,651 | 7.56 |
| rRNA genes | 3,230 | 5.25 |
| Other viruses | 109 | 0.18 |
Valid reads are sequences (i) for which a cloning vector was screened; (ii) with an estimated error rate of less than 1 base per 100 bp; and (iii) that were 30 nucleotides in length or longer.
