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. 2005 Jan 31;102(6):1998–2003. doi: 10.1073/pnas.0405537102

Table 1. Target genes (partial list) of Ndt80p identified from its TFPE by using a core motif CACAAAA with one mismatch allowed.

Gene/ORF Probability Extended motif* Expression ratio, log2
SPS3 1.000 TTAGCGACACAAAAGAGACCT -5.644
SPS4 1.000 CGCGCGCCACAAAAACGTATC -5.644
SSP1 1.000 CAGGCGACACAAAATCATGAA -4.644
CWP1 0.993 AAGGTGCCACAAAAGAAAACA -3.184
SPO74 0.987 CTTGTGACACAAAAGAGAACA -3.059
HSP12 0.921 GGGGCGGCACAAAATAACATA -2.644
YFR032C 0.918 GAAGCGTCACAAATTAATAAC -2.556
IME2 0.837 CTTTACCCAAAAAATAAAACT -2.737
*

Informative positions are highlighted in bold.