Table 7.

DNA barcodes of accepted Colletotrichum spp. in the Col. graminicola and caudatum complexes.

Species	Isolates1	GenBank accession numbers2									References
		ITS	gapdh	chs-1	his3	act	tub2	apn2	ApMat	sod2
Colletotrichumalcorni	IMI 176619T	EU554079, JX076858	–	–	–	–	–	EU364987	FJ377901	EU554187	Crouch et al., 2009c, Crouch, 2014
Col. baltimorense	BPI 892771T	JX076866	–	–	–	–	–	JX076927	JX076905	JX076886	Crouch (2014)
Col. caudasporum	CGMCC 3.15106T	JX625162	KC843512	–	–	KC843526	JX625190	–	–	–	Tao et al. (2013)
Col. caudatum	BPI 423339LT	JX076915	–	–	–	–	–	–	–	JX076878	Crouch (2014)
	CBS 131602ET	JX076860	–	–	–	–	–	JX076932	JX076893	JX076878	Crouch (2014)
Col. cereale	CBS 129663	DQ126177, JQ005774	–	JQ005795	JQ005816	JQ005837	JQ005858	–	–	DQ133277	Crouch et al. (2006), O'Connell et al. (2012)
Col. duyunensis	CGMCC 3.15105T	JX625160	KC843515	–	–	KC843530	JX625187	–	–	–	Tao et al. (2013)
Col. echinochloae	MAFF 511473T	AB439811	–	–	–	–	–	–	–	AB440153	Moriwaki & Tsukiboshi (2009),
Col. eleusines	MAFF 511155T	EU554131, JX519218	–	JX519226	–	JX519234	JX519243	EU365038	–	EU554234	Cannon et al., 2012, Crouch et al., 2009b, Crouch et al., 2009c,
Col. endophytum	CGMCC 3.15108T	JX625177	KC843521	–	–	KC843533	JX625206	–	–	–	Tao et al. (2013)
Col. eremochloae	CBS 129661T	JQ478447, JX519220	–	JX519228	–	JX519236	JX519245	JQ478476	JQ478462	JQ478449	Cannon et al., 2012, Crouch and Tomaso-Peterson, 2012
Col. falcatum	CBS 147945T	HM171877, JQ005772		HM171677, JQ005793	JQ005814	JQ005835	JQ005856	HM569770	HM569769	–	Prihastuti et al. (2010), O'Connell et al. (2012)
Col. graminicola	CBS 130836T	DQ003110, JQ005767	–	JQ005788	HQ005809	JQ005830	JQ005851	–	FJ377994	–	Crouch et al., 2009a, Crouch et al., 2009c, Du et al., 2005, O'Connell et al., 2012
Col. hanaui	MAFF 3054042T	EU554101, JX519217	–	JX519225	–	–	JX519242	EU365008	FJ377922	EU554205	Crouch et al., 2009b, Crouch et al., 2009c, Cannon et al., 2012
Col. jacksonii	MAFF 305460T	EU554108, JX519216	–	JX519224	–	JX519233	JX519241	–	–	EU554212	Crouch et al., 2009b, Crouch et al., 2009c, Cannon et al., 2012
Col. miscanthi	MAFF 510857T	EU554121, JX519221	–	JX519229	–	JX519237	JX519246	EU365028	–	EU554224	Crouch et al., 2009b, Crouch et al., 2009c, Cannon et al., 2012
Col. navitas	CBS 125086T	GQ919067, JQ005769	–	JQ005790	JQ005811	JQ005832	JQ005853	GQ919069	GQ919071	GQ919073	Crouch et al., 2009a, O'Connell et al., 2012
Col. nicholsonii	MAFF 511115T	EU554126, JQ005770	–	JQ005791	JQ005812	JQ005833	JQ005854	EU365033	FJ377946	EU554229	Crouch et al., 2009b, Crouch et al., 2009c, O'Connell et al., 2012
Col. ochracea	CGMCC 3.15104T	JX625168	KC843513	–	–	KC843527	JX625183	–	–	–	Tao et al. (2013)
Col. paspali	MAFF 305403T	EU554100, JX519219	–	JX519227	–	JX519235	JX519244	EU365007	FJ377921	EU554204	Crouch et al., 2009b, Crouch et al., 2009c, Cannon et al., 2012
Col. somersetense	CBS 131599T	JX076862	–	–	–	–	–	JX076918	JX076895	JX076880	Crouch (2014)
Col. sublineola	CBS 131301T	DQ003114, JQ005771	–	JQ005792	JQ005813	JQ005834	JQ005855	EU365121	FJ378029	DO132051	Crouch et al. (2006), Crouch and Tomaso-Peterson, 2012, O'Connell et al., 2012
Col. zoysia	MAFF 238573T	JX076871	–	–	–	–	–	JX076922	JX076899	–	Crouch (2014)

¹BPI: US National Fungus Collections, Beltsville, Maryland, USA; CBS: Westerdijk Fungal Biodiversity Institute, Utrecht, the Netherlands; CGMCC: Chinese General Microbiological Culture Collection Center, Beijing, China; IMI: International Mycological Institute, Kew, UK; MAFF: Ministry of Agriculture, Forestry and Fisheries, Tsukuba, Ibaraki, Japan. ^{LT, ET} and ^T indicate lectotype specimen and ex-epitype and ex- type strains, respectively.

²ITS: internal transcribed spacers and intervening 5.8S nrDNA; gapdh: partial glyceraldehyde-3-phosphate dehydrogenase gene; chs-1: partial chitin synthase-1 gene; his: partial histone H3 gene; act: partial actin gene; tub2: partial beta-tubulin gene; apn2: partial DNA lyase gene; ApMat: partial Apn2-Mat1-2 intergenic spacer and partial mating type (Mat1-2) gene; sod2: partial manganese superoxide dismutase gene.