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. 2017 Feb 11;17(4):427–439. doi: 10.1007/s10142-017-0545-0

Table 1.

Initial classification of LINEs in the avian genomes by MGEScan-non-LTR

Clade Budgerigar Chicken Medium ground finch Turkey Zebra finch
Total 772 262 42 46 30
CR1 Total 771 262 40 46 21
Elements with intact RT 55 14 0 0 0
Elements with ORF1 6 2 0 0 0
Elements with ORF2 (>600 aa) 11 8 0 0 0
Full elements 1 1 0 0 0
R2 Total 0 0 2 0 9
Elements with intact RT 0 0 1 0 6
Elements with ORF1 0 0 0
Elements with ORF2 (>600 aa) 0 0 1 0 5
Full elements 0 0 1 0 5
RTE Total 1 0 0 0 0
Elements with intact RT 0 0 0 0 0