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. 2016 Jul 18;95(7):517–525I. doi: 10.2471/BLT.16.182105

Table 1. Proteomic sequencing data used to compare identity between viruses and within viruses.

Species Collection date WHO Region No. of samples
ZIKV 1947–2015 African, Americas, Western Pacific 34
DENV1 01/01/2010– 06/01/2016 African, Americas, European, South-East Asia, Western Pacific 171
DENV2 01/01/2010– 06/01/2016 Americas, Eastern Mediterranean, South-East Asia, Western Pacific 158
DENV3 01/01/2010– 06/01/2016 Americas, Eastern Mediterranean, South-East Asia, Western Pacific 62
DENV4 01/01/2010– 06/01/2016 Americas, South-East Asia, Western Pacific 58
WNV 01/01/2008–06/01/2016 Americas, European, South-East Asia, 44
JEV 1951–2012 South-East Asia, Western Pacific 19
YFV 1981–2016 African, Americas, Western Pacific 31
CHIKV 1953-2015 African, Americas, European, South-East Asia, Western Pacific 212

CHIKV: chikungunya virus; DENV1−4: dengue virus serotype 1; JEV: Japanese encephalitis virus; WHO: World Health Organization; WNV: West Nile virus; YFV; yellow fever virus; ZIKV: Zika virus.

Note: For ZIKV, we used data set A from Faria et al.17 We downloaded the protein sequences of JEV, YFV and CHIKV from the National Center of Biotechnology Information (NCBI) protein database and sequences for DENV serotypes 1–4 and WNV from NCBI virus variation resource.18