. 2016 Jul 18;95(7):517–525I. doi: 10.2471/BLT.16.182105

Table 2. The lead candidate list of Zika virus protein fragments with low proportion of identity with other flaviviruses and low polymorphism.

Position in proteome, aa		Protein	Average pairwise difference	Polymorphic sites, %	k-mer^a	Homology with other flaviviruses, %				Peptide sequence
Start	End	Protein	Average pairwise difference	Polymorphic sites, %	k-mer^a	DENV	JEV	YFV	WNV	Peptide sequence
26	95	capsid C	0.0078	0.0429	70	0.4857	0.4857	0.2286	0.5000	PFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRII
28	97	capsid C	0.0019	0.0286	70	0.5000	0.4714	0.2286	0.5000	GGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINA
32	101	capsid C	0.0077	0.0429	70	0.5000	0.4714	0.2571	0.4857	RLPAGLLLGHGPIRMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEK
33	102	capsid C	0.0077	0.0429	70	0.4857	0.4714	0.2571	0.4857	LPAGLLLGHGPIRMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
34	103	capsid C	0.0077	0.0429	70	0.4857	0.4857	0.2571	0.5000	PAGLLLGHGPIRMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKR
35	104	capsid C	0.0077	0.0429	70	0.4857	0.4857	0.2571	0.5000	AGLLLGHGPIRMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRR
45	94	capsid C	0.0027	0.0400	50	0.4800	0.4600	0.2600	0.4800	RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRI
54	93	capsid C	0.0033	0.0500	40	0.4750	0.4000	0.2500	0.4250	LRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLR
55	94	capsid C	0.0033	0.0500	40	0.4750	0.4000	0.2500	0.4250	RFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRI
56	95	capsid C	0.0033	0.0500	40	0.4750	0.4000	0.2500	0.4250	FTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRII
57	96	capsid C	0.0033	0.0500	40	0.4750	0.4000	0.2250	0.4250	TAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIIN
58	97	capsid C	0.0033	0.0500	40	0.4750	0.3750	0.2000	0.4000	AIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINA
59	98	capsid C	0.0033	0.0500	40	0.4750	0.3750	0.2250	0.4000	IKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINAR
60	99	capsid C	0.0033	0.0500	40	0.4750	0.4000	0.2500	0.3750	KPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARK
61	100	capsid C	0.0033	0.0500	40	0.4750	0.4000	0.2250	0.3750	PSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKE
87	92	capsid C	0.0000	0.0000	6	0.3333	0.1667	0.1667	0.1667	DLAAML
131	136	pr	0.0000	0.0000	6	0.1667	0.1667	0.0000	0.1667	AYYMYL
132	137	pr	0.0000	0.0000	6	0.1667	0.1667	0.0000	0.1667	YYMYLD
133	138	pr	0.0000	0.0000	6	0.1667	0.1667	0.0000	0.1667	YMYLDR
231	240	membrane	0.0000	0.0000	10	0.3000	0.3000	0.2000	0.3000	SQTWLESREY
411	450	envelope	0.0044	0.0750	40	0.4500	0.4250	0.2250	0.3750	CSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIGHETDENR
412	451	envelope	0.0044	0.0750	40	0.4250	0.4250	0.2000	0.3500	SKKMTGKSIQPENLEYRIMLSVHGSQHSGMIGHETDENRA
413	452	envelope	0.0044	0.0750	40	0.4250	0.4250	0.2250	0.3750	KKMTGKSIQPENLEYRIMLSVHGSQHSGMIGHETDENRAK
414	453	envelope	0.0044	0.0750	40	0.4250	0.4250	0.2000	0.3750	KMTGKSIQPENLEYRIMLSVHGSQHSGMIGHETDENRAKV
415	454	envelope	0.0044	0.0750	40	0.4500	0.4000	0.2000	0.3500	MTGKSIQPENLEYRIMLSVHGSQHSGMIGHETDENRAKVE
419	448	envelope	0.0020	0.0333	30	0.4667	0.4000	0.2000	0.3667	SIQPENLEYRIMLSVHGSQHSGMIGHETDE
420	449	envelope	0.0020	0.0333	30	0.4667	0.4000	0.2000	0.3667	IQPENLEYRIMLSVHGSQHSGMIGHETDEN
421	450	envelope	0.0020	0.0333	30	0.4667	0.3667	0.2000	0.3333	QPENLEYRIMLSVHGSQHSGMIGHETDENR
422	451	envelope	0.0020	0.0333	30	0.4667	0.3667	0.2000	0.3000	PENLEYRIMLSVHGSQHSGMIGHETDENRA
436	445	envelope	0.0000	0.0000	10	0.4000	0.3000	0.2000	0.3000	SQHSGMIGHE
438	447	envelope	0.0000	0.0000	10	0.4000	0.3000	0.2000	0.3000	HSGMIGHETD
439	448	envelope	0.0000	0.0000	10	0.4000	0.3000	0.2000	0.3000	SGMIGHETDE
440	449	envelope	0.0000	0.0000	10	0.4000	0.2000	0.2000	0.2000	GMIGHETDEN
441	450	envelope	0.0000	0.0000	10	0.4000	0.2000	0.2000	0.2000	MIGHETDENR
442	451	envelope	0.0000	0.0000	10	0.4000	0.3000	0.2000	0.2000	IGHETDENRA
626	665	envelope	0.0029	0.0500	40	0.4000	0.4750	0.3000	0.4750	KVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELD
627	666	envelope	0.0029	0.0500	40	0.4000	0.4750	0.3000	0.4750	VPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDP
629	658	envelope	0.0020	0.0333	30	0.4333	0.4667	0.3000	0.4333	AQMAVDMQTLTPVGRLITANPVITESTENS
913	918	NS1	0.0000	0.0000	6	0.3333	0.0000	0.0000	0.0000	FVRAAK
913	922	NS1	0.0000	0.0000	10	0.4000	0.1000	0.2000	0.2000	FVRAAKTNNS
914	919	NS1	0.0000	0.0000	6	0.3333	0.0000	0.0000	0.0000	VRAAKT
915	920	NS1	0.0000	0.0000	6	0.3333	0.1667	0.1667	0.1667	RAAKTN
1294	1343	NS2A	0.0043	0.0600	50	0.3600	0.3600	0.3000	0.3200	LAILAALTPLARGTLLVAWRAGLATCGGFMLLSLKGKGSVKKNLPFVMAL
1295	1344	NS2A	0.0043	0.0600	50	0.3800	0.3600	0.2800	0.3200	AILAALTPLARGTLLVAWRAGLATCGGFMLLSLKGKGSVKKNLPFVMALG
1299	1318	NS2A	0.0000	0.0000	20	0.3500	0.3500	0.2500	0.3500	ALTPLARGTLLVAWRAGLAT
1299	1338	NS2A	0.0018	0.0250	40	0.3500	0.3250	0.2500	0.3250	ALTPLARGTLLVAWRAGLATCGGFMLLSLKGKGSVKKNLP
1299	1348	NS2A	0.0043	0.0600	50	0.3600	0.3400	0.3000	0.3000	ALTPLARGTLLVAWRAGLATCGGFMLLSLKGKGSVKKNLPFVMALGLTAV
1300	1319	NS2A	0.0000	0.0000	20	0.3500	0.3500	0.3000	0.3500	LTPLARGTLLVAWRAGLATC
1300	1339	NS2A	0.0018	0.0250	40	0.3500	0.3250	0.2500	0.3250	LTPLARGTLLVAWRAGLATCGGFMLLSLKGKGSVKKNLPF
1300	1349	NS2A	0.0043	0.0600	50	0.3600	0.3400	0.3000	0.3000	LTPLARGTLLVAWRAGLATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVR
1301	1320	NS2A	0.0000	0.0000	20	0.3500	0.3500	0.2500	0.3500	TPLARGTLLVAWRAGLATCG
1301	1340	NS2A	0.0018	0.0250	40	0.3750	0.3000	0.2500	0.3000	TPLARGTLLVAWRAGLATCGGFMLLSLKGKGSVKKNLPFV
1302	1311	NS2A	0.0000	0.0000	10	0.4000	0.3000	0.2000	0.3000	PLARGTLLVA
1302	1321	NS2A	0.0000	0.0000	20	0.3500	0.3000	0.2000	0.3000	PLARGTLLVAWRAGLATCGG
1303	1322	NS2A	0.0000	0.0000	20	0.3500	0.2500	0.1500	0.2500	LARGTLLVAWRAGLATCGGF
1304	1323	NS2A	0.0000	0.0000	20	0.3500	0.2500	0.1500	0.2500	ARGTLLVAWRAGLATCGGFM
1305	1324	NS2A	0.0000	0.0000	20	0.4000	0.3000	0.1500	0.3000	RGTLLVAWRAGLATCGGFML
1309	1318	NS2A	0.0000	0.0000	10	0.4000	0.3000	0.2000	0.3000	LVAWRAGLAT
1310	1319	NS2A	0.0000	0.0000	10	0.4000	0.2000	0.2000	0.2000	VAWRAGLATC
1311	1320	NS2A	0.0000	0.0000	10	0.4000	0.3000	0.2000	0.3000	AWRAGLATCG
1312	1321	NS2A	0.0000	0.0000	10	0.3000	0.3000	0.2000	0.3000	WRAGLATCGG
1313	1322	NS2A	0.0000	0.0000	10	0.2000	0.3000	0.2000	0.3000	RAGLATCGGF
1314	1323	NS2A	0.0000	0.0000	10	0.1000	0.2000	0.2000	0.2000	AGLATCGGFM
1315	1324	NS2A	0.0000	0.0000	10	0.2000	0.3000	0.2000	0.3000	GLATCGGFML
1317	1322	NS2A	0.0000	0.0000	6	0.1667	0.1667	0.1667	0.1667	ATCGGF
1318	1323	NS2A	0.0000	0.0000	6	0.1667	0.1667	0.1667	0.1667	TCGGFM
1326	1331	NS2A	0.0000	0.0000	6	0.1667	0.1667	0.1667	0.1667	SLKGKG
1328	1333	NS2A	0.0000	0.0000	6	0.1667	0.1667	0.1667	0.1667	KGKGSV
1328	1337	NS2A	0.0000	0.0000	10	0.3000	0.3000	0.2000	0.3000	KGKGSVKKNL
1354	1363	NS2A	0.0000	0.0000	10	0.3000	0.3000	0.2000	0.3000	INVVGLLLLT
1459	1468	NS2B	0.0000	0.0000	10	0.3000	0.3000	0.2000	0.3000	GPPMREIILK
1460	1469	NS2B	0.0000	0.0000	10	0.3000	0.2000	0.2000	0.2000	PPMREIILKV
1461	1470	NS2B	0.0000	0.0000	10	0.3000	0.2000	0.2000	0.3000	PMREIILKVV
1462	1467	NS2B	0.0000	0.0000	6	0.3333	0.1667	0.1667	0.1667	MREIIL
1462	1471	NS2B	0.0000	0.0000	10	0.4000	0.1000	0.1000	0.2000	MREIILKVVL
1463	1472	NS2B	0.0000	0.0000	10	0.4000	0.1000	0.1000	0.2000	REIILKVVLM
1474	1493	NS2B	0.0000	0.0000	20	0.4000	0.2500	0.2000	0.3500	ICGMNPIAIPFAAGAWYVYV
1475	1494	NS2B	0.0000	0.0000	20	0.4000	0.3000	0.2500	0.3000	CGMNPIAIPFAAGAWYVYVK
1476	1495	NS2B	0.0000	0.0000	20	0.4000	0.3500	0.2500	0.3000	GMNPIAIPFAAGAWYVYVKT
1477	1496	NS2B	0.0000	0.0000	20	0.3500	0.3500	0.2500	0.3000	MNPIAIPFAAGAWYVYVKTG
1478	1497	NS2B	0.0000	0.0000	20	0.3500	0.4000	0.2500	0.3500	NPIAIPFAAGAWYVYVKTGK
1483	1492	NS2B	0.0000	0.0000	10	0.4000	0.2000	0.2000	0.3000	PFAAGAWYVY
1484	1493	NS2B	0.0000	0.0000	10	0.3000	0.2000	0.2000	0.2000	FAAGAWYVYV
2116	2215	NS4A	0.0091	0.0600	100	0.3900	0.3500	0.3500	0.4400	GAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEI
2117	2216	NS4A	0.0091	0.0600	100	0.3900	0.3500	0.3400	0.4400	AAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIE
2118	2217	NS4A	0.0084	0.0500	100	0.4000	0.3500	0.3400	0.4400	AFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEP
2119	2218	NS4A	0.0084	0.0500	100	0.4000	0.3400	0.3300	0.4400	FGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPA
2120	2179	NS4A	0.0057	0.0500	60	0.4333	0.3333	0.3500	0.3833	GVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTV
2120	2189	NS4A	0.0049	0.0429	70	0.3857	0.3286	0.3286	0.4286	GVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMR
2120	2199	NS4A	0.0052	0.0500	80	0.4125	0.3875	0.3375	0.4625	GVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFG
2120	2209	NS4A	0.0046	0.0444	90	0.3889	0.3556	0.3333	0.4667	GVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWL
2120	2219	NS4A	0.0041	0.0400	100	0.3900	0.3400	0.3300	0.4400	GVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPAR
2121	2180	NS4A	0.0057	0.0500	60	0.4333	0.3333	0.3500	0.3833	VMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVS
2121	2190	NS4A	0.0049	0.0429	70	0.3857	0.3286	0.3286	0.4143	VMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRN
2121	2200	NS4A	0.0052	0.0500	80	0.4125	0.3875	0.3500	0.4500	VMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGM
2121	2210	NS4A	0.0046	0.0444	90	0.3889	0.3556	0.3444	0.4556	VMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLM
2121	2220	NS4A	0.0041	0.0400	100	0.4000	0.3500	0.3400	0.4400	VMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARI
2122	2181	NS4A	0.0057	0.0500	60	0.4333	0.3333	0.3500	0.4000	MEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSL
2122	2191	NS4A	0.0049	0.0429	70	0.4000	0.3429	0.3429	0.4286	MEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNK
2122	2201	NS4A	0.0052	0.0500	80	0.4125	0.3875	0.3500	0.4625	MEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMV
2122	2211	NS4A	0.0046	0.0444	90	0.4000	0.3667	0.3444	0.4667	MEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMW
2122	2221	NS4A	0.0041	0.0400	100	0.4100	0.3600	0.3400	0.4500	MEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIA
2123	2182	NS4A	0.0057	0.0500	60	0.4500	0.3500	0.3667	0.4167	EALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLG
2123	2192	NS4A	0.0049	0.0429	70	0.4143	0.3571	0.3571	0.4429	EALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKG
2123	2202	NS4A	0.0052	0.0500	80	0.4250	0.3875	0.3625	0.4750	EALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVT
2123	2212	NS4A	0.0046	0.0444	90	0.4000	0.3667	0.3556	0.4667	EALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWL
2123	2222	NS4A	0.0041	0.0400	100	0.4100	0.3600	0.3400	0.4500	EALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIAC
2124	2183	NS4A	0.0024	0.0333	60	0.4500	0.3333	0.3667	0.4000	ALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGI
2124	2193	NS4A	0.0020	0.0286	70	0.4286	0.3571	0.3714	0.4429	ALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGI
2124	2203	NS4A	0.0027	0.0375	80	0.4250	0.3875	0.3625	0.4750	ALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTL
2124	2213	NS4A	0.0024	0.0333	90	0.4000	0.3556	0.3556	0.4556	ALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLS
2124	2223	NS4A	0.0021	0.0300	100	0.4100	0.3500	0.3400	0.4400	ALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACV
2125	2184	NS4A	0.0024	0.0333	60	0.4500	0.3500	0.3667	0.4167	LGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIF
2125	2194	NS4A	0.0020	0.0286	70	0.4429	0.3714	0.3714	0.4571	LGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIG
2125	2204	NS4A	0.0027	0.0375	80	0.4250	0.3875	0.3625	0.4875	LGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLG
2125	2214	NS4A	0.0024	0.0333	90	0.4111	0.3667	0.3556	0.4667	LGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSE
2125	2224	NS4A	0.0021	0.0300	100	0.4100	0.3600	0.3400	0.4500	LGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVL
2126	2185	NS4A	0.0024	0.0333	60	0.4500	0.3333	0.3500	0.4167	GTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFF
2126	2195	NS4A	0.0020	0.0286	70	0.4571	0.3714	0.3571	0.4571	GTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGK
2126	2205	NS4A	0.0027	0.0375	80	0.4250	0.3750	0.3500	0.4875	GTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGA
2126	2215	NS4A	0.0024	0.0333	90	0.4222	0.3556	0.3444	0.4556	GTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEI
2126	2225	NS4A	0.0021	0.0300	100	0.4200	0.3500	0.3300	0.4400	GTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLI
2127	2186	NS4A	0.0024	0.0333	60	0.4333	0.3167	0.3500	0.4000	TLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
2127	2196	NS4A	0.0020	0.0286	70	0.4571	0.3714	0.3714	0.4429	TLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKM
2127	2206	NS4A	0.0027	0.0375	80	0.4250	0.3625	0.3500	0.4750	TLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGAS
2127	2216	NS4A	0.0024	0.0333	90	0.4222	0.3444	0.3444	0.4444	TLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIE
2127	2226	NS4A	0.0021	0.0300	100	0.4200	0.3500	0.3300	0.4300	TLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIV
2128	2187	NS4A	0.0024	0.0333	60	0.4333	0.3167	0.3500	0.4167	LPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVL
2128	2197	NS4A	0.0020	0.0286	70	0.4571	0.3857	0.3714	0.4571	LPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMG
2128	2207	NS4A	0.0027	0.0375	80	0.4250	0.3625	0.3500	0.4750	LPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASA
2128	2217	NS4A	0.0024	0.0333	90	0.4333	0.3444	0.3556	0.4444	LPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEP
2128	2227	NS4A	0.0021	0.0300	100	0.4200	0.3500	0.3300	0.4300	LPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVV
2129	2188	NS4A	0.0024	0.0333	60	0.4333	0.3333	0.3500	0.4333	PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLM
2129	2198	NS4A	0.0020	0.0286	70	0.4429	0.3857	0.3571	0.4571	PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGF
2129	2208	NS4A	0.0027	0.0375	80	0.4125	0.3625	0.3375	0.4750	PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAW
2129	2218	NS4A	0.0024	0.0333	90	0.4222	0.3444	0.3444	0.4444	PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPA
2129	2228	NS4A	0.0021	0.0300	100	0.4200	0.3500	0.3300	0.4300	PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVF
2130	2179	NS4A	0.0029	0.0400	50	0.4600	0.3200	0.3600	0.3600	GHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTV
2130	2189	NS4A	0.0024	0.0333	60	0.4167	0.3167	0.3333	0.4167	GHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMR
2130	2199	NS4A	0.0031	0.0429	70	0.4429	0.3857	0.3429	0.4571	GHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFG
2130	2209	NS4A	0.0027	0.0375	80	0.4125	0.3500	0.3375	0.4625	GHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWL
2130	2219	NS4A	0.0024	0.0333	90	0.4111	0.3333	0.3333	0.4333	GHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPAR
2130	2229	NS4A	0.0021	0.0300	100	0.4100	0.3500	0.3200	0.4300	GHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFL
2131	2180	NS4A	0.0029	0.0400	50	0.4600	0.3200	0.3600	0.3800	HMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVS
2131	2190	NS4A	0.0024	0.0333	60	0.4167	0.3167	0.3333	0.4167	HMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRN
2131	2200	NS4A	0.0031	0.0429	70	0.4429	0.3857	0.3571	0.4571	HMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGM
2131	2210	NS4A	0.0027	0.0375	80	0.4125	0.3500	0.3500	0.4625	HMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLM
2131	2220	NS4A	0.0024	0.0333	90	0.4222	0.3444	0.3444	0.4444	HMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARI
2131	2230	NS4A	0.0021	0.0300	100	0.4200	0.3600	0.3300	0.4400	HMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLL
2132	2181	NS4A	0.0029	0.0400	50	0.4400	0.3000	0.3600	0.3800	MTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSL
2132	2191	NS4A	0.0024	0.0333	60	0.4333	0.3167	0.3500	0.4167	MTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNK
2132	2201	NS4A	0.0031	0.0429	70	0.4429	0.3714	0.3571	0.4571	MTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMV
2132	2211	NS4A	0.0027	0.0375	80	0.4250	0.3500	0.3500	0.4625	MTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMW
2132	2221	NS4A	0.0024	0.0333	90	0.4333	0.3444	0.3444	0.4444	MTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIA
2132	2231	NS4A	0.0021	0.0300	100	0.4200	0.3500	0.3300	0.4300	MTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLL
2133	2192	NS4A	0.0024	0.0333	60	0.4500	0.3333	0.3667	0.4333	TERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKG
2133	2202	NS4A	0.0031	0.0429	70	0.4571	0.3714	0.3714	0.4714	TERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVT
2133	2212	NS4A	0.0027	0.0375	80	0.4250	0.3500	0.3625	0.4625	TERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWL
2133	2222	NS4A	0.0024	0.0333	90	0.4333	0.3444	0.3444	0.4444	TERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIAC
2133	2232	NS4A	0.0021	0.0300	100	0.4300	0.3600	0.3400	0.4300	TERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLV
2134	2203	NS4A	0.0031	0.0429	70	0.4571	0.3857	0.3714	0.4857	ERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTL
2134	2213	NS4A	0.0027	0.0375	80	0.4250	0.3500	0.3625	0.4625	ERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLS
2134	2223	NS4A	0.0024	0.0333	90	0.4333	0.3444	0.3444	0.4444	ERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACV
2134	2233	NS4A	0.0021	0.0300	100	0.4300	0.3700	0.3500	0.4400	ERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVV
2135	2204	NS4A	0.0031	0.0429	70	0.4571	0.3714	0.3714	0.5000	RFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLG
2135	2214	NS4A	0.0027	0.0375	80	0.4375	0.3500	0.3625	0.4750	RFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSE
2135	2224	NS4A	0.0024	0.0333	90	0.4333	0.3444	0.3444	0.4556	RFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVL
2135	2234	NS4A	0.0021	0.0300	100	0.4400	0.3700	0.3500	0.4500	RFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVL
2136	2215	NS4A	0.0027	0.0375	80	0.4375	0.3500	0.3625	0.4750	FQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEI
2136	2225	NS4A	0.0024	0.0333	90	0.4333	0.3444	0.3444	0.4556	FQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLI
2136	2235	NS4A	0.0021	0.0300	100	0.4400	0.3800	0.3500	0.4600	FQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI
2137	2216	NS4A	0.0027	0.0375	80	0.4375	0.3500	0.3625	0.4750	QEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIE
2137	2226	NS4A	0.0024	0.0333	90	0.4333	0.3556	0.3444	0.4556	QEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIV
2137	2236	NS4A	0.0021	0.0300	100	0.4500	0.3900	0.3600	0.4700	QEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIP
2138	2217	NS4A	0.0027	0.0375	80	0.4500	0.3500	0.3750	0.4750	EAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEP
2138	2227	NS4A	0.0024	0.0333	90	0.4333	0.3556	0.3444	0.4556	EAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVV
2138	2237	NS4A	0.0021	0.0300	100	0.4600	0.4000	0.3700	0.4800	EAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPE
2139	2208	NS4A	0.0031	0.0429	70	0.4429	0.3571	0.3571	0.5000	AIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAW
2139	2218	NS4A	0.0027	0.0375	80	0.4500	0.3375	0.3625	0.4625	AIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPA
2139	2228	NS4A	0.0024	0.0333	90	0.4444	0.3444	0.3444	0.4444	AIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVF
2139	2238	NS4A	0.0021	0.0300	100	0.4700	0.4000	0.3700	0.4800	AIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEP
2140	2189	NS4A	0.0029	0.0400	50	0.4600	0.3000	0.3600	0.4400	IDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMR
2140	2199	NS4A	0.0036	0.0500	60	0.4833	0.3833	0.3667	0.4833	IDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFG
2140	2209	NS4A	0.0031	0.0429	70	0.4429	0.3429	0.3571	0.4857	IDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWL
2140	2219	NS4A	0.0027	0.0375	80	0.4375	0.3250	0.3500	0.4500	IDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPAR
2140	2229	NS4A	0.0024	0.0333	90	0.4333	0.3444	0.3333	0.4444	IDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFL
2140	2239	NS4A	0.0021	0.0300	100	0.4700	0.4000	0.3600	0.4800	IDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPE
2141	2190	NS4A	0.0029	0.0400	50	0.4600	0.3000	0.3600	0.4400	DNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRN
2141	2210	NS4A	0.0031	0.0429	70	0.4429	0.3429	0.3714	0.4857	DNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLM
2141	2220	NS4A	0.0027	0.0375	80	0.4500	0.3375	0.3625	0.4625	DNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARI
2141	2230	NS4A	0.0024	0.0333	90	0.4444	0.3556	0.3444	0.4556	DNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLL
2141	2240	NS4A	0.0021	0.0300	100	0.4800	0.4100	0.3600	0.4900	DNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEK
2142	2191	NS4A	0.0029	0.0400	50	0.4600	0.3000	0.3600	0.4400	NLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNK
2142	2201	NS4A	0.0036	0.0500	60	0.4667	0.3667	0.3667	0.4833	NLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMV
2142	2211	NS4A	0.0031	0.0429	70	0.4429	0.3429	0.3571	0.4857	NLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMW
2142	2221	NS4A	0.0027	0.0375	80	0.4500	0.3375	0.3500	0.4625	NLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIA
2142	2231	NS4A	0.0024	0.0333	90	0.4333	0.3444	0.3333	0.4444	NLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLL
2142	2241	NS4A	0.0021	0.0300	100	0.4800	0.4100	0.3600	0.4900	NLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQ
2143	2212	NS4A	0.0031	0.0429	70	0.4286	0.3429	0.3714	0.4857	LAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWL
2143	2222	NS4A	0.0027	0.0375	80	0.4375	0.3375	0.3500	0.4625	LAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIAC
2143	2232	NS4A	0.0024	0.0333	90	0.4333	0.3556	0.3444	0.4444	LAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLV
2143	2242	NS4A	0.0021	0.0300	100	0.4800	0.4200	0.3700	0.5000	LAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQR
2144	2213	NS4A	0.0031	0.0429	70	0.4286	0.3429	0.3714	0.4857	AVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLS
2144	2223	NS4A	0.0027	0.0375	80	0.4375	0.3375	0.3500	0.4625	AVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACV
2144	2233	NS4A	0.0024	0.0333	90	0.4333	0.3667	0.3556	0.4556	AVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVV
2145	2214	NS4A	0.0031	0.0429	70	0.4429	0.3571	0.3714	0.5000	VLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSE
2145	2224	NS4A	0.0027	0.0375	80	0.4375	0.3500	0.3500	0.4750	VLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVL
2145	2234	NS4A	0.0024	0.0333	90	0.4444	0.3778	0.3556	0.4667	VLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVL
2146	2215	NS4A	0.0031	0.0429	70	0.4571	0.3571	0.3571	0.4857	LMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEI
2146	2225	NS4A	0.0027	0.0375	80	0.4500	0.3500	0.3375	0.4625	LMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLI
2146	2235	NS4A	0.0024	0.0333	90	0.4556	0.3889	0.3444	0.4667	LMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI
2147	2216	NS4A	0.0031	0.0429	70	0.4429	0.3571	0.3429	0.4857	MRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIE
2147	2226	NS4A	0.0027	0.0375	80	0.4375	0.3625	0.3250	0.4625	MRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIV
2147	2236	NS4A	0.0024	0.0333	90	0.4556	0.4000	0.3556	0.4778	MRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIP
2148	2217	NS4A	0.0031	0.0429	70	0.4571	0.3571	0.3571	0.4857	RAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEP
2148	2227	NS4A	0.0027	0.0375	80	0.4375	0.3625	0.3250	0.4625	RAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVV
2148	2237	NS4A	0.0024	0.0333	90	0.4667	0.4111	0.3667	0.4889	RAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPE
2149	2218	NS4A	0.0031	0.0429	70	0.4571	0.3571	0.3571	0.4857	AETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPA
2149	2228	NS4A	0.0027	0.0375	80	0.4500	0.3625	0.3375	0.4625	AETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVF
2149	2238	NS4A	0.0024	0.0333	90	0.4778	0.4222	0.3778	0.5000	AETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEP
2150	2219	NS4A	0.0031	0.0429	70	0.4571	0.3429	0.3571	0.4714	ETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPAR
2150	2229	NS4A	0.0027	0.0375	80	0.4500	0.3625	0.3375	0.4625	ETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFL
2150	2239	NS4A	0.0024	0.0333	90	0.4889	0.4222	0.3778	0.5000	ETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPE
2151	2220	NS4A	0.0031	0.0429	70	0.4571	0.3429	0.3571	0.4714	TGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARI
2151	2230	NS4A	0.0027	0.0375	80	0.4500	0.3625	0.3375	0.4625	TGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLL
2151	2240	NS4A	0.0024	0.0333	90	0.4889	0.4222	0.3667	0.5000	TGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEK
2152	2221	NS4A	0.0031	0.0429	70	0.4714	0.3571	0.3571	0.4857	GSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIA
2152	2231	NS4A	0.0027	0.0375	80	0.4500	0.3625	0.3375	0.4625	GSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLL
2153	2222	NS4A	0.0031	0.0429	70	0.4571	0.3429	0.3429	0.4714	SRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIAC
2153	2232	NS4A	0.0027	0.0375	80	0.4500	0.3625	0.3375	0.4500	SRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLV
2154	2223	NS4A	0.0031	0.0429	70	0.4571	0.3429	0.3286	0.4714	RPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACV
2154	2233	NS4A	0.0027	0.0375	80	0.4500	0.3750	0.3375	0.4625	RPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVV
2155	2224	NS4A	0.0031	0.0429	70	0.4429	0.3571	0.3143	0.4714	PYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVL
2155	2234	NS4A	0.0027	0.0375	80	0.4500	0.3875	0.3250	0.4625	PYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVL
2156	2225	NS4A	0.0031	0.0429	70	0.4571	0.3571	0.3143	0.4714	YKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLI
2156	2235	NS4A	0.0027	0.0375	80	0.4625	0.4000	0.3375	0.4750	YKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI
2157	2226	NS4A	0.0031	0.0429	70	0.4429	0.3714	0.3000	0.4714	KAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIV
2157	2236	NS4A	0.0027	0.0375	80	0.4625	0.4125	0.3375	0.4875	KAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIP
2158	2227	NS4A	0.0020	0.0286	70	0.4429	0.3714	0.3000	0.4714	AAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVV
2159	2228	NS4A	0.0020	0.0286	70	0.4571	0.3714	0.3143	0.4714	AAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVF
2160	2219	NS4A	0.0024	0.0333	60	0.4500	0.3500	0.3167	0.4833	AAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPAR
2160	2229	NS4A	0.0020	0.0286	70	0.4429	0.3714	0.3000	0.4714	AAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFL
2161	2230	NS4A	0.0020	0.0286	70	0.4571	0.3857	0.3143	0.4857	AQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLL
2162	2231	NS4A	0.0020	0.0286	70	0.4571	0.3857	0.3143	0.4857	QLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLL
2163	2232	NS4A	0.0010	0.0143	70	0.4714	0.4000	0.3286	0.4857	LPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLV
2164	2233	NS4A	0.0010	0.0143	70	0.4571	0.4000	0.3429	0.4857	PETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVV
2165	2234	NS4A	0.0010	0.0143	70	0.4571	0.4000	0.3286	0.4857	ETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVL
2166	2235	NS4A	0.0010	0.0143	70	0.4571	0.4143	0.3286	0.5000	TLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI
2168	2227	NS4A	0.0012	0.0167	60	0.4333	0.3667	0.3000	0.4833	ETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVV
2169	2228	NS4A	0.0012	0.0167	60	0.4333	0.3500	0.3167	0.4833	TIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVF
2170	2229	NS4A	0.0012	0.0167	60	0.4167	0.3500	0.3167	0.4833	IMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFL
2171	2230	NS4A	0.0012	0.0167	60	0.4333	0.3500	0.3333	0.4833	MLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLL
2172	2231	NS4A	0.0012	0.0167	60	0.4167	0.3500	0.3167	0.4833	LLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLL
2173	2232	NS4A	0.0012	0.0167	60	0.4167	0.3500	0.3167	0.4667	LGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLV
2174	2233	NS4A	0.0012	0.0167	60	0.4167	0.3667	0.3333	0.4833	GLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVV
2177	2226	NS4A	0.0014	0.0200	50	0.4000	0.3600	0.3000	0.4800	GTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIV
2178	2227	NS4A	0.0014	0.0200	50	0.3800	0.3600	0.2800	0.4800	TVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVV
2179	2228	NS4A	0.0014	0.0200	50	0.4000	0.3600	0.3000	0.4800	VSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVF
2182	2231	NS4A	0.0014	0.0200	50	0.4200	0.4000	0.3200	0.4800	GIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLL
2183	2232	NS4A	0.0014	0.0200	50	0.4200	0.4000	0.3200	0.4600	IFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLV
2184	2233	NS4A	0.0014	0.0200	50	0.4000	0.4200	0.3400	0.4800	FFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVV
2185	2234	NS4A	0.0014	0.0200	50	0.4000	0.4200	0.3400	0.4800	FVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVL
2186	2235	NS4A	0.0014	0.0200	50	0.4200	0.4400	0.3600	0.4800	VLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI
2188	2227	NS4A	0.0018	0.0250	40	0.4000	0.4000	0.3250	0.4500	MRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVV
2189	2228	NS4A	0.0018	0.0250	40	0.4000	0.3750	0.3250	0.4250	RNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVF
2190	2229	NS4A	0.0018	0.0250	40	0.4000	0.4000	0.3250	0.4500	NKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFL
2192	2231	NS4A	0.0018	0.0250	40	0.4000	0.4000	0.3250	0.4500	GIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLL
2193	2232	NS4A	0.0018	0.0250	40	0.4000	0.4000	0.3250	0.4250	IGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLV
2203	2222	NS4A	0.0000	0.0000	20	0.4000	0.2500	0.3000	0.3500	LGASAWLMWLSEIEPARIAC
2207	2226	NS4A	0.0000	0.0000	20	0.4000	0.3000	0.3000	0.2500	AWLMWLSEIEPARIACVLIV
2208	2227	NS4A	0.0000	0.0000	20	0.4000	0.3000	0.3000	0.2500	WLMWLSEIEPARIACVLIVV
2210	2229	NS4A	0.0000	0.0000	20	0.4000	0.3500	0.3000	0.3000	MWLSEIEPARIACVLIVVFL
2212	2231	NS4A	0.0000	0.0000	20	0.4000	0.3500	0.3000	0.3000	LSEIEPARIACVLIVVFLLL
2316	2335	NS4B	0.0000	0.0000	20	0.4000	0.3500	0.3000	0.4000	TPAVQHAVTTSYNNYSLMAM
2317	2326	NS4B	0.0000	0.0000	10	0.3000	0.3000	0.2000	0.3000	PAVQHAVTTS
2318	2323	NS4B	0.0000	0.0000	6	0.1667	0.1667	0.1667	0.1667	AVQHAV
2318	2327	NS4B	0.0000	0.0000	10	0.2000	0.3000	0.2000	0.3000	AVQHAVTTSY
2318	2337	NS4B	0.0000	0.0000	20	0.3500	0.2500	0.3000	0.3000	AVQHAVTTSYNNYSLMAMAT
2319	2328	NS4B	0.0000	0.0000	10	0.2000	0.3000	0.2000	0.3000	VQHAVTTSYN
2319	2338	NS4B	0.0000	0.0000	20	0.4000	0.3000	0.3000	0.3500	VQHAVTTSYNNYSLMAMATQ
2418	2427	NS4B	0.0000	0.0000	10	0.3000	0.3000	0.2000	0.3000	VVTDIDTMTI
2419	2428	NS4B	0.0000	0.0000	10	0.3000	0.2000	0.2000	0.2000	VTDIDTMTID
2422	2427	NS4B	0.0000	0.0000	6	0.1667	0.0000	0.1667	0.0000	IDTMTI
2423	2428	NS4B	0.0000	0.0000	6	0.3333	0.0000	0.0000	0.0000	DTMTID
2453	2458	NS4B	0.0000	0.0000	6	0.3333	0.0000	0.1667	0.0000	TAWGWG
2453	2462	NS4B	0.0000	0.0000	10	0.4000	0.3000	0.2000	0.3000	TAWGWGEAGA
2454	2459	NS4B	0.0000	0.0000	6	0.3333	0.1667	0.1667	0.1667	AWGWGE
2703	2708	NS5	0.0000	0.0000	6	0.3333	0.1667	0.1667	0.1667	YTSTMM
2704	2709	NS5	0.0000	0.0000	6	0.3333	0.1667	0.1667	0.1667	TSTMME
2705	2710	NS5	0.0000	0.0000	6	0.3333	0.1667	0.1667	0.1667	STMMET
3403	3412	NS5	0.0000	0.0000	10	0.3000	0.0000	0.2000	0.0000	STQVRYLGEE
3404	3413	NS5	0.0000	0.0000	10	0.3000	0.0000	0.2000	0.0000	TQVRYLGEEG
3405	3414	NS5	0.0000	0.0000	10	0.4000	0.0000	0.2000	0.0000	QVRYLGEEGS
3408	3413	NS5	0.0000	0.0000	6	0.3333	0.0000	0.1667	0.0000	YLGEEG

aa: amino acid; DENV: dengue virus; JEV: Japanese encephalitis virus; NS: non-structural; pr: precursor; WNV: West Nile virus; YFV: yellow fever virus.

^a K-mer is the protein fragment’s length in amino acids.

Note: None of the peptides had any homology with chikungunya virus.