Table 2.
The Classification of Shared and Nonshared LTR-Retrotransposons at the Loci 9002, 9008, 9009, adh1, and bz1
LTR-Retrotransposon Family
|
Element Type
|
Locus9002
|
Locus9008
|
Locus9009
|
adh1 Locus
|
bz1 Locus
|
|||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
B73 | Mo17 | Shared | B73 | Mo17 | Shared | B73 | Mo17 | Shared | B73 | Mo17 | Shared | McC | B73 | Mo17 | Shared | ||
ji | copia | 1 | 5 | – | 9 | 4 | 3 | 7 | 5 | 3 | 1 | 1 | 1 | – | – | – | – |
opie | copia | 2 | 1 | – | 3 | 4 | 2 | 5 | 4 | 4 | 3 | 2 | 2 | 2 | – | – | – |
prem | copia | – | 1 | – | 2 | 1 | – | – | – | – | – | – | – | – | – | – | – |
fourf | copia | – | – | – | – | – | – | – | – | – | 1 | 1 | 1 | – | – | – | – |
huck | gypsy | 2 | 3 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | – | 1 | – |
grande | gypsy | – | – | – | – | – | – | 1 | – | – | – | – | – | – | 1 | 1 | 1 |
zeon | gypsy | 2 | 2 | 1 | 1 | – | – | – | – | – | – | 1 | – | – | – | – | – |
tekay | gypsy | – | – | – | 1 | 1 | 1 | – | – | – | – | – | – | – | 1 | – | – |
cinful | gypsy | – | – | – | 1 | 1 | 1 | – | – | – | 1 | – | – | – | – | – | – |
rire | gypsy | 1 | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
milt | gypsy | – | – | – | – | – | – | 1 | – | – | – | – | – | – | – | – | – |
shadowspawn | – | – | – | – | 1 | 2 | 1 | – | – | – | – | – | – | – | – | – | – |
reina | gypsy | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
ruda | – | – | 2 | – | – | – | – | – | – | – | 1 | – | – | – | – | – | – |
xilon | – | 1 | 2 | – | – | – | – | – | – | – | – | – | – | – | 1 | – | – |
dagaf | – | – | 1 | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
giepum | – | 1 | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
reiver | – | – | – | – | – | 1 | – | – | – | – | – | – | – | – | – | – | – |
raider | copia | 1 | 1 | 1 | – | – | – | – | – | – | – | – | – | – | – | – | – |
flip | – | – | – | – | 1 | – | – | – | – | – | – | – | – | – | – | – | – |
jaws | gypsy | 1 | 1 | 1 | – | – | – | – | – | – | – | – | – | – | – | – | – |
Total | 12 | 19 | 4 | 21 | 15 | 9 | 15 | 11 | 8 | 8 | 6 | 5 | 4 | 3 | 2 | 1 |