Table 2.
The Classification of Shared and Nonshared LTR-Retrotransposons at the Loci 9002, 9008, 9009, adh1, and bz1
| LTR-Retrotransposon Family
|
Element Type
|
Locus9002
|
Locus9008
|
Locus9009
|
adh1 Locus
|
bz1 Locus
|
|||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| B73 | Mo17 | Shared | B73 | Mo17 | Shared | B73 | Mo17 | Shared | B73 | Mo17 | Shared | McC | B73 | Mo17 | Shared | ||
| ji | copia | 1 | 5 | – | 9 | 4 | 3 | 7 | 5 | 3 | 1 | 1 | 1 | – | – | – | – |
| opie | copia | 2 | 1 | – | 3 | 4 | 2 | 5 | 4 | 4 | 3 | 2 | 2 | 2 | – | – | – |
| prem | copia | – | 1 | – | 2 | 1 | – | – | – | – | – | – | – | – | – | – | – |
| fourf | copia | – | – | – | – | – | – | – | – | – | 1 | 1 | 1 | – | – | – | – |
| huck | gypsy | 2 | 3 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | – | 1 | – |
| grande | gypsy | – | – | – | – | – | – | 1 | – | – | – | – | – | – | 1 | 1 | 1 |
| zeon | gypsy | 2 | 2 | 1 | 1 | – | – | – | – | – | – | 1 | – | – | – | – | – |
| tekay | gypsy | – | – | – | 1 | 1 | 1 | – | – | – | – | – | – | – | 1 | – | – |
| cinful | gypsy | – | – | – | 1 | 1 | 1 | – | – | – | 1 | – | – | – | – | – | – |
| rire | gypsy | 1 | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
| milt | gypsy | – | – | – | – | – | – | 1 | – | – | – | – | – | – | – | – | – |
| shadowspawn | – | – | – | – | 1 | 2 | 1 | – | – | – | – | – | – | – | – | – | – |
| reina | gypsy | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
| ruda | – | – | 2 | – | – | – | – | – | – | – | 1 | – | – | – | – | – | – |
| xilon | – | 1 | 2 | – | – | – | – | – | – | – | – | – | – | – | 1 | – | – |
| dagaf | – | – | 1 | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
| giepum | – | 1 | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
| reiver | – | – | – | – | – | 1 | – | – | – | – | – | – | – | – | – | – | – |
| raider | copia | 1 | 1 | 1 | – | – | – | – | – | – | – | – | – | – | – | – | – |
| flip | – | – | – | – | 1 | – | – | – | – | – | – | – | – | – | – | – | – |
| jaws | gypsy | 1 | 1 | 1 | – | – | – | – | – | – | – | – | – | – | – | – | – |
| Total | 12 | 19 | 4 | 21 | 15 | 9 | 15 | 11 | 8 | 8 | 6 | 5 | 4 | 3 | 2 | 1 | |