Table 2.
Estimated long duplicated sequences (>10 bp) flanking LTR5_Hs
| Chr | Position | Region | Structure | Length | Preintegratioin a | Mismatchesb | Referencec |
|---|---|---|---|---|---|---|---|
| chr3 | 125689444–125689493 | 3q21.2 | solo_LTR | 18 | n.d. | 2 | this study |
| chr4 | 16078281–16079255 | 4p15.32 | solo LTRd | 96 | n.d. | 3 | [13] |
| chr4 | 161582077–161582438 | 4q32.1 | provirus | 206 | n.d. | 1 | this study |
| chr6 | 3055034–3055749 | 6p25.2 | truncated provirus | 111 | determined | 1 | this study |
| chr7 | 16237347–16238314 | 7p21.2 | solo_LTR | 250 | determined | 2 | [13] |
| chr13 | 23387789–23388759 | 13q12.12 | solo_LTR | 13 | n.d. | 2 | this study |
| chr16 | 74833302–74834258 | 16q23.1 | solo_LTR | 61 | n.d. | 0 | [13] |
| chr21 | 19933659–19941962 | 21q21.1 | provirus | 450 | n.d. | 0 | this study |
a n.d. Not determined
bNumber of mismatches and gaps between the duplicated sequences on the left and right
cPreviously reported by Mamedov et al. [13]
dTwo nucleotides present between the estimated sequences and either of the LTRs