Skip to main content
. 2017 Jun 29;15:52. doi: 10.1186/s12915-017-0397-z

Table 2.

Protein sequence conservation in D14/KAI2 proteins

Invariant Highly Well Conserved
Whole family 6.8 17.7 42.6 68.3
Eu-KAI2 22.3 50.6 72.5 89.1
Lycophyte KAI2 48.3 60.4 83.0 95.1
Angiosperm KAI2 24.5 54.7 76.2 94.3
DDK super-clade 5.7 17.7 34.0 63.8
Gymnosperm DLK4 34.3 45.7 70.2 88.7
Eu-D14 24.2 49.8 70.2 89.4
Angiosperm D14 27.9 56.2 78.1 91.3
DLK23 4.9 20 34.3 60.4
Gymnosperm DLK23 18.1 37.7 63.4 87.6
Angiosperm DLK2 10.2 21.2 44.5 68.7
Angiosperm DLK3 21.9 31.7 55.1 78.1

Table showing the degrees of protein sequence conservation in various D14/KAI2 clades. Four degrees of conservation were used: ‘invariant’ (>99% of sequences in a given clade have the same amino acid at a given position), ‘highly conserved’ (>90% of sequences in a given clade have the same amino acid at a given position), ‘well conserved’ (>70% of sequences in a given clade have the same amino acid at a given position) and conserved (>50% of sequences in a given clade have the same amino acid at a given position). The values in the table indicate the percentage of positions that fall into these categories in a given clade. So, for instance, 6.8% of positions are invariant in the whole family. Values are cumulative, so ‘conserved’ includes all the positions that are well conserved, highly conserved and invariant. Bold text indicates values greater than 70%