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. 2004 Dec 22;6(1):R2. doi: 10.1186/gb-2004-6-1-r2

Table 5.

Comparison of known essential human nutrients with corresponding biosynthetic pathways in MetaCyc and in HumanCyc

Essential nutrient in humans Biosynthetic pathway in MetaCyc? Biosynthetic pathway inferred in humans?
Amino acids
Arginine Y N
Histidine Y N
Isoleucine Y N
Leucine Y N
Lysine Y N
Methionine Y N
Phenylalanine Y N
Threonine Y N
Valine Y N
Vitamins
Ascorbic acid (Vitamin C) Y N
Biotin (Vitamin H) Y N
Folic acid (Vitamin M) Y N
Niacin (Vitamin B3) N N
Pantothenic acid Y Y
Pyridoxine (Vitamin B6) N N
Riboflavin (Vitamin B2) Y N
Thiamine (Vitamin B1) Y N
Cobalamin (Vitamin B12) Y N
Retinol (Vitamin A) N N
Vitamin D N N
Tocopherol (Vitamin E) N N
Vitamin K N N

Note that a pathway cannot be predicted in HumanCyc if it does not exist in MetaCyc.