Table 5.
Comparison of known essential human nutrients with corresponding biosynthetic pathways in MetaCyc and in HumanCyc
Essential nutrient in humans | Biosynthetic pathway in MetaCyc? | Biosynthetic pathway inferred in humans? |
Amino acids | ||
Arginine | Y | N |
Histidine | Y | N |
Isoleucine | Y | N |
Leucine | Y | N |
Lysine | Y | N |
Methionine | Y | N |
Phenylalanine | Y | N |
Threonine | Y | N |
Valine | Y | N |
Vitamins | ||
Ascorbic acid (Vitamin C) | Y | N |
Biotin (Vitamin H) | Y | N |
Folic acid (Vitamin M) | Y | N |
Niacin (Vitamin B3) | N | N |
Pantothenic acid | Y | Y |
Pyridoxine (Vitamin B6) | N | N |
Riboflavin (Vitamin B2) | Y | N |
Thiamine (Vitamin B1) | Y | N |
Cobalamin (Vitamin B12) | Y | N |
Retinol (Vitamin A) | N | N |
Vitamin D | N | N |
Tocopherol (Vitamin E) | N | N |
Vitamin K | N | N |
Note that a pathway cannot be predicted in HumanCyc if it does not exist in MetaCyc.