Table 1. List of breeds and summary statistics.
Breed | Location | Pn | Ho | He | f | Ar | *HSWAD |
---|---|---|---|---|---|---|---|
African Group | |||||||
Namaqua Afrikaaner | South Africa | 0.688 | 0.288 | 0.254 | 0.269 | 1.688 | 14.5 |
Ronderib Afrikaaner | South Africa | 0.811 | 0.322 | 0.296 | 0.187 | 1.880 | 14.0 |
Djallonké | Nigeria | 0.769 | 0.286 | 0.277 | 0.277 | 1.769 | - |
African Dorper | South Africa | 0.884 | 0.340 | 0.333 | 0.137 | 1.884 | 11.7 |
Egyptian Barki | Egypt | 0.948 | 0.369 | 0.371 | 0.066 | 1.948 | 13.2 |
Red Maasai | Kenya | 0.884 | 0.326 | 0.325 | 0.173 | 1.884 | 15.6 |
Ethiopian Menz | Ethiopia | 0.871 | 0.326 | 0.326 | 0.176 | 1.871 | 15.2 |
Iberian Group | |||||||
Australian Merino | Australia | 0.952 | 0.368 | 0.376 | 0.067 | 1.952 | 11.1 |
Bergamasca | Italy | 0.940 | 0.364 | 0.369 | 0.078 | 1.939 | 10.2 |
Castellana | Spain | 0.951 | 0.381 | 0.377 | 0.082 | 1.951 | 10.8 |
Ojalada | Spain | 0.953 | 0.378 | 0.377 | 0.045 | 1.953 | 11.2 |
Rasa Aragonesa | Spain | 0.965 | 0.385 | 0.386 | 0.022 | 1.965 | 11.0 |
Spanish Churra | Spain | 0.938 | 0.364 | 0.366 | 0.076 | 1.938 | 11.2 |
Spanish Merino | Spain | 0.951 | 0.376 | 0.374 | 0.046 | 1.951 | 10.7 |
British Group | |||||||
Dorset Horn | UK | 0.811 | 0.325 | 0.286 | 0.182 | 1.811 | 7.4 |
Dorset Poll | Australia | 0.893 | 0.347 | 0.342 | 0.118 | 1.893 | 7.9 |
Soay | UK | 0.745 | 0.269 | 0.268 | 0.317 | 1.745 | 10.0 |
Australian Suffolk | Ausralia | 0.941 | 0.376 | 0.371 | 0.049 | 1.941 | 8.7 |
Irish Suffolk | UK | 0.864 | 0.315 | 0.328 | 0.199 | 1.864 | 9.4 |
Wiltshire Horn | UK | 0.752 | 0.272 | 0.263 | 0.309 | 1.752 | 8.0 |
New World | |||||||
Brazilian Creole | Brazil | 0.946 | 0.341 | 0.371 | 0.136 | 1.946 | 10.8 |
Navajo Churro | SW USA | 0.935 | 0.372 | 0.365 | 0.260 | 1.935 | 10.3 |
Gulf Coast Native | Alabama | 0.951 | 0.373 | 0.373 | 0.055 | 1.951 | 10.7 |
St Elizabeth | Jamaica | 0.946 | 0.374 | 0.372 | 0.050 | 1.946 | 13.0 |
Caribbean Hair | |||||||
Barbados Blackbelly | Barbados | 0.880 | 0.331 | 0.332 | 0.159 | 1.880 | 23.8 |
Morada Nova | Brazil | 0.860 | 0.311 | 0.319 | 0.208 | 1.860 | 21.1 |
Santa Inés | Brazil | 0.919 | 0.352 | 0.353 | 0.107 | 1.919 | 23.8 |
St Croix | Virgin Islands | 0.832 | 0.285 | 0.307 | 0.274 | 1.831 | 16.4 |
Asia | |||||||
Norduz | SW Asia | 0.891 | 0.356 | 0.339 | 0.102 | 1.891 | 12.0 |
Intrapopulation summary statistics for 38, 337 SNP loci from 29 breeds used in this study: coefficient of inbreeding (f), fraction of polymorphic loci (Pn), observed heterozgosity (HO), expected heterozygosity (He), allelic richness (Ar), and mean IBD shared between Djallonké and sample breed in Mb.