Table 1. Pathways and gene sets enriched in RBM10-only RIP-Seq targets.
Pathways & gene sets | Benjamini value |
---|---|
KEGG | |
Metabolic pathways | 1.78E-8 |
Oxidative phosphorylation | 9.34E-5 |
Base excision pair | 1.56E-4 |
Huntington’s disease | 4.37E-4 |
Alzheimer’s disease | 1.77E-3 |
Neurotrophin signaling pathway | 1.79E-3 |
RNA transport | 1.79E-3 |
Parkinson’s disease | 2.46E-3 |
GO Molecular Function | |
Protein binding | 3.62E-34 |
Binding | 6.15E-21 |
RNA binding | 1.07E-13 |
Structural constituent of ribosome | 1.63E-7 |
Catalytic activity | 5.31E-7 |
Transcription cofactor activity | 2.07E-7 |
Heterocycylic compound binding | 2.07E-6 |
Organic cyclic compound binding | 2.07E-6 |
Transcription factor binding transcription factor activity | 4.98E-6 |
Transferase activity | 3.29E-6 |
Protein binding transcription factor activity | 4.34E-6 |
Enzyme binding | 2.30E-6 |
Nucleic acid binding | 2.30E-5 |
Kinase binding | 2.30E-5 |
Transcription corepressor activity | 3.61E-4 |
Protein kinase binding | 1.19E-4 |
Mitogen-activated protein kinase binding | 2.13E-3 |
Significantly enriched gene sets with Benjamini values below 0.005 are listed.