Table 1.
Number of genes with an eQTL
| Control | Heat stress | Recovery | |
|---|---|---|---|
| cis-eQTLa | 1138 | 1186 | 1215 |
| N2 higher | 809 (71.1%) | 802 (67.6%) | 883 (72.7%) |
| CB4856 higher | 329 (29.9%) | 384 (32.4%) | 332 (27.3%) |
| trans-eQTL | 751 | 1560 | 739 |
| N2 higher | 300 (39.9%) | 583 (37.4%) | 393 (53.2%) |
| CB4856 higher | 451 (60.1%) | 977 (62.6%) | 346 (46.8%) |
| Totalb | 1797 | 2626 | 1880 |
a cis-eQTL were called if the QTL peak lies within 1 Mb of the affected gene, or if the affected gene lies within the 1.5 LOD-drop confidence interval
bThe differences between the total and the summation of the individual cis- and trans-eQTL is due to genes with both a cis- and trans-eQTL