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Experimental design (n denotes the number of arrays)
| Group | Labelling method | Input/channel | Breast versus Ref. (n) | Ref. versus Breast (n) | Ref. versus Ref. (n) |
|---|---|---|---|---|---|
| 1 | TAcKLE | 2 ng | 2 | 1 | 1 |
| 2 | TAcKLE | 20 ng | 2 | 1 | 1 |
| 3 | TAcKLE | 200 ng | 2 | 1 | 1 |
| 4 | TAcKLE | 2000 ng | 2 | 1 | 1 |
| 5 | RT | 40 μg | 2 | 1 | 1 |
